RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 TSPAN9O75954 239 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 TTRP02766 147 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 FCGR1AP12314 374 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 ATP6V1E1P36543 226 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 PROK1P58294 105 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 RELBQ01201 579 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 ACSM1Q08AH1 577 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 ODF4Q2M2E3 257 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 C2orf68Q2NKX9 166 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 CLVS2Q5SYC1 327 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 ZBTB37Q5TC79 503 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 AADACL4Q5VUY2 407 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 C12orf73Q69YU5 71 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 BATF2Q8N1L9 274 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 YIPF7Q8N8F6 280 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 ZNRF1Q8ND25 227 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 LINC01006Q8NI28 216 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 AQP3Q92482 292 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 DUS3LQ96G46 650 aaKnown RBP10.19□□□□□ -0.78
SGCA-202ENST00000344627 ZNF488Q96MN9 340 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 MNTQ99583 582 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 RBM4BQ9BQ04 359 aaKnown RBP10.19□□□□□ -0.78
SGCA-202ENST00000344627 RIBC2Q9H4K1 309 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 ADGRL4Q9HBW9 690 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 CLN6Q9NWW5 311 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.19□□□□□ -0.78
SGCA-202ENST00000344627 ENOPH1Q9UHY7 261 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 SNX5Q9Y5X3 404 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 R4GMQ9 66 aa10.19□□□□□ -0.78
SGCA-202ENST00000344627 IGKV1D-17A0A075B6S4 117 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 RFPL4AA6NLU0 287 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 RFPL4AL1F8VTS6 287 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 RNASEK-C17orf49H0YIS7 233 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 NXPH2O95156 264 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 APOL3O95236 402 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 KRT8P05787 483 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 HAAOP46952 286 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 CAV3P56539 151 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 EGR3Q06889 387 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 SRSF4Q08170 494 aaKnown RBP10.18□□□□□ -0.78
SGCA-202ENST00000344627 SMIM21Q3B7S5 101 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 NCR3LG1Q68D85 454 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 KDM4DQ6B0I6 523 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 DHRS7BQ6IAN0 325 aaPredicted RBP10.18□□□□□ -0.78
SGCA-202ENST00000344627 ASPHD2Q6ICH7 369 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 ZNF573Q86YE8 665 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 PNKDQ8N490 385 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 Q8N7P7 452 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 OR10H4Q8NGA5 316 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 C8orf46Q8TAG6 207 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 TRMT10AQ8TBZ6 339 aaKnown RBP10.18□□□□□ -0.78
SGCA-202ENST00000344627 CIB1Q99828 191 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 ADI1Q9BV57 179 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 FAM234AQ9H0X4 552 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 MOB1AQ9H8S9 216 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 TCF7L1Q9HCS4 588 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 RASL12Q9NYN1 266 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 MRM2Q9UI43 246 aaKnown RBP10.18□□□□□ -0.78
SGCA-202ENST00000344627 VPREB3Q9UKI3 123 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.18□□□□□ -0.78
SGCA-202ENST00000344627 SLC22A13Q9Y226 551 aa10.18□□□□□ -0.78
SGCA-202ENST00000344627 SAC3D1A6NKF1 404 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 J3QT63 122 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 M0R1W7 72 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 SYNGR1O43759 233 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 RRP9O43818 475 aaKnown RBP10.17□□□□□ -0.78
SGCA-202ENST00000344627 ANGPTL7O43827 346 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 ACP7Q6ZNF0 438 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 CCDC121Q6ZUS5 278 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 ELMOD2Q8IZ81 293 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 GABARAPL1Q9H0R8 117 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 METTL8Q9H825 291 aaKnown RBP10.17□□□□□ -0.78
SGCA-202ENST00000344627 PLEKHA1Q9HB21 404 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 RAB18Q9NP72 206 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 ZNRD1Q9P1U0 126 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 OR14J1Q9UGF5 321 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 WARS2Q9UGM6 360 aaKnown RBP10.17□□□□□ -0.78
SGCA-202ENST00000344627 SLC7A11Q9UPY5 501 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 POLDIP2Q9Y2S7 368 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 MAB21L2Q9Y586 359 aa10.17□□□□□ -0.78
SGCA-202ENST00000344627 FAM230AA0A1W2PPH8 454 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 A0A1W2PQL4 384 aaPredicted RBP10.16□□□□□ -0.78
SGCA-202ENST00000344627 METTL15A6NJ78 407 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 SLC1A7O00341 560 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 DLGAP1O14490 977 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 SRSF10O75494 262 aaKnown RBP10.16□□□□□ -0.78
SGCA-202ENST00000344627 INMTO95050 263 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 IGLV3-1P01715 115 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 HTR1FP30939 366 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 PRDX2P32119 198 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 SAA4P35542 130 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 POLR2IP36954 125 aaKnown RBP10.16□□□□□ -0.78
SGCA-202ENST00000344627 CEBPDP49716 269 aaPredicted RBP10.16□□□□□ -0.78
SGCA-202ENST00000344627 UBE2E1P51965 193 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 EFNB1P98172 346 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 AANATQ16613 207 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 SSX6Q7RTT6 188 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 ANGPTL5Q86XS5 388 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 POC1AQ8NBT0 407 aa10.16□□□□□ -0.78
SGCA-202ENST00000344627 OR4M1Q8NGD0 313 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms