RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 LDLRAD3Q86YD5 345 aa16.5■□□□□ 0.23
CEACAM3-201ENST00000344550 ZNF561Q8N587 486 aa16.5■□□□□ 0.23
CEACAM3-201ENST00000344550 LHX4Q969G2 390 aa16.5■□□□□ 0.23
CEACAM3-201ENST00000344550 METTL8Q9H825 291 aaKnown RBP16.5■□□□□ 0.23
CEACAM3-201ENST00000344550 PLEKHA1Q9HB21 404 aa16.5■□□□□ 0.23
CEACAM3-201ENST00000344550 SNTG1Q9NSN8 517 aa16.5■□□□□ 0.23
CEACAM3-201ENST00000344550 SLC7A11Q9UPY5 501 aa16.5■□□□□ 0.23
CEACAM3-201ENST00000344550 MMP24Q9Y5R2 645 aa16.5■□□□□ 0.23
CEACAM3-201ENST00000344550 A0A1B0GW55 424 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 ANKRD61A6NGH8 418 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 MAGEB4O15481 346 aaPredicted RBP16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 SYT7O43581 403 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 RPP14O95059 124 aaKnown RBP16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 SERPINA3P01011 423 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 DUX4L2P0CJ85 424 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 DUX4L3P0CJ86 424 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 DUX4L4P0CJ87 422 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 DUX4L5P0CJ88 424 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 DUX4L6P0CJ89 424 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 DUX4L7P0CJ90 424 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 IL24Q13007 206 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 BLMHQ13867 455 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 FDX2Q6P4F2 183 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 DUX4L9Q6RFH8 374 aaPredicted RBP16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 ACP7Q6ZNF0 438 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 VMO1Q7Z5L0 202 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 PP6455Q8WZ26 134 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 MRPL48Q96GC5 212 aaKnown RBP16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 DUX5Q96PT3 197 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 NRIP2Q9BQI9 281 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 C9orf16Q9BUW7 83 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 ONECUT1Q9UBC0 465 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 DUX4Q9UBX2 424 aa16.49■□□□□ 0.23
CEACAM3-201ENST00000344550 A0A1W2PPH5 198 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 J3QRE1 110 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 MELTFP08582 738 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 EEF1B2P24534 225 aaKnown RBP16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 GABRA2P47869 451 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 GMFBP60983 142 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 TMEM244Q5VVB8 128 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 OR5D13Q8NGL4 314 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 H1FXQ92522 213 aaKnown RBP16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 Q96MT0 163 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 TBX5Q99593 518 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 FAM234AQ9H0X4 552 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 SEBOXQ9HB31 216 aaPredicted RBP16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 HES4Q9HCC6 221 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 MAB21L2Q9Y586 359 aa16.48■□□□□ 0.23
CEACAM3-201ENST00000344550 SLC1A7O00341 560 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 ISG15P05161 165 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 NDUFB7P17568 137 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 FUT6P51993 359 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 ELF3P78545 371 aaPredicted RBP16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 ZNF85Q03923 595 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 ACSM1Q08AH1 577 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 CBR4Q8N4T8 237 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 ACBD7Q8N6N7 88 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 DNAAF1Q8NEP3 725 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 DYRK2Q92630 601 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 CHST5Q9GZS9 411 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 SLITRK2Q9H156 845 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 DPAGT1Q9H3H5 408 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 GPR173Q9NS66 373 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 FAM96BQ9Y3D0 163 aa16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 SOX21Q9Y651 276 aaPredicted RBP16.47■□□□□ 0.23
CEACAM3-201ENST00000344550 SLC16A6O15403 523 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 ENTPD6O75354 484 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 NXPH2O95156 264 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 NDUFA7O95182 113 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 KNG1P01042 644 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 CRYBA1P05813 215 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 FBP1P09467 338 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 PRDX2P32119 198 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 CCR9P51686 369 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 UBE2E1P51965 193 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 ERVK11-1P61568 191 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 ACTA2P62736 377 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 ACTG2P63267 376 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 RUSC1-AS1Q66K80 236 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 FGFRL1Q8N441 504 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 Q8N7P7 452 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 ZNRF1Q8ND25 227 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 RNFT2Q96EX2 444 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 GNG8Q9UK08 70 aa16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 EXOGQ9Y2C4 368 aaKnown RBP16.46■□□□□ 0.23
CEACAM3-201ENST00000344550 MDFIC2A0A1B0GVS7 189 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 hCG_1809904A0A1W2PP81 198 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 A0A1W2PPE2 198 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 A0A1W2PQ09 198 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 A0A1W2PR64 198 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 A0A1W2PRV1 198 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 DAPL1A0PJW8 107 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 RFPL4AA6NLU0 287 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 RFPL4AL1F8VTS6 287 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 SELLP14151 372 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 MRPL28Q13084 256 aaKnown RBP16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 CNN3Q15417 329 aaKnown RBP16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 CALHM1Q8IU99 346 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 Q8IYB0 196 aa16.45■□□□□ 0.22
CEACAM3-201ENST00000344550 PRSS35Q8N3Z0 413 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms