RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 OR51F2Q8NH61 342 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 SNAPC3Q92966 411 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 S100PBPQ96BU1 408 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 HDHD3Q9BSH5 251 aaPredicted RBP11.63□□□□□ -0.55
CDC42-202ENST00000344548 URM1Q9BTM9 101 aaKnown RBP11.63□□□□□ -0.55
CDC42-202ENST00000344548 CDH20Q9HBT6 801 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 RANGRFQ9HD47 186 aaPredicted RBP11.63□□□□□ -0.55
CDC42-202ENST00000344548 Q9UFV3 132 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 ZNF230Q9UIE0 474 aaPredicted RBP11.63□□□□□ -0.55
CDC42-202ENST00000344548 CACNA1AO00555 2505 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 IGHV1-18A0A0C4DH31 117 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 ZNF732B4DXR9 585 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 GEMIN2O14893 280 aaKnown RBP11.63□□□□□ -0.55
CDC42-202ENST00000344548 AKAIN1P0CW23 69 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 ANXA7P20073 488 aaKnown RBP11.63□□□□□ -0.55
CDC42-202ENST00000344548 CALCRP30988 508 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 HAAOP46952 286 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 P2RY6Q15077 328 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 ST3GAL2Q16842 350 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 NKPD1Q17RQ9 610 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 CEACAM21Q3KPI0 293 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 ZBTB37Q5TC79 503 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 CCDC36Q8IYA8 594 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 OR56B1Q8NGI3 324 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 GIMAP1Q8WWP7 306 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 MAFIPQ8WZ33 124 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 FBXW5Q969U6 566 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 DMRTB1Q96MA1 342 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 PECRQ9BY49 303 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 METTL9Q9H1A3 318 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 NPAP1Q9NZP6 1156 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 IL36RNQ9UBH0 155 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 FZR1Q9UM11 496 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 SLC25A15Q9Y619 301 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 ITPR1Q14643 2758 aa11.63□□□□□ -0.55
CDC42-202ENST00000344548 C7orf66A4D0T2 115 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 NAP1L6A6NFF2 107 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 PYCARD-AS1I3L0S3 204 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 ICMTO60725 284 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 IGLV1-44P01699 117 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 CRHP06850 196 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 RAD52P43351 418 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 EIF2B2P49770 351 aaKnown RBP11.62□□□□□ -0.55
CDC42-202ENST00000344548 CD83Q01151 205 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 PSG7Q13046 419 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 ATAD3CQ5T2N8 411 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 ZNF782Q6ZMW2 699 aaPredicted RBP11.62□□□□□ -0.55
CDC42-202ENST00000344548 ZDHHC23Q8IYP9 409 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 FBXL14Q8N1E6 418 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 TMEM229BQ8NBD8 167 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 OR1J1Q8NGS3 322 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 OR5P3Q8WZ94 311 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 ST8SIA4Q92187 359 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 DYRK2Q92630 601 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 SLAMF9Q96A28 289 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 MRGPRFQ96AM1 343 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 SLC6A7Q99884 636 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 NUDT16L1Q9BRJ7 211 aaKnown RBP11.62□□□□□ -0.55
CDC42-202ENST00000344548 CHST6Q9GZX3 395 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 TAS2R8Q9NYW2 309 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 SYNGR1O43759 233 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 NDUFB6O95139 128 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 RAB3DO95716 219 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 SELEP16581 610 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 ACTBP60709 375 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 ACTG1P63261 375 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 CBX3Q13185 183 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 MSMPQ1L6U9 139 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 NKAPLQ5M9Q1 402 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 FBXW12Q6X9E4 464 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 WDR86Q86TI4 376 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 ZNF488Q96MN9 340 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 MTCH1Q9NZJ7 389 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 COPZ2Q9P299 210 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 ZNF835Q9Y2P0 537 aa11.62□□□□□ -0.55
CDC42-202ENST00000344548 TPRP12270 2363 aaKnown RBP11.62□□□□□ -0.55
CDC42-202ENST00000344548 IGKV1D-8A0A087WSZ0 117 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 A8MXE2 369 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 ZNF736B4DX44 427 aaPredicted RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 H0YL77 283 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 PRRG2O14669 202 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 CYB5AP00167 134 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 CSTBP04080 98 aaKnown RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 CD74P04233 296 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 VSIG10L2P0DP72 767 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 HOXB1P14653 301 aaPredicted RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 BCL3P20749 454 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 HOXC12P31275 282 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 ID4P47928 161 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 TAS2R19P59542 299 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 SF3B4Q15427 424 aaKnown RBP eCLIP11.61□□□□□ -0.553e-6■■■□□ 19.1
CDC42-202ENST00000344548 CSNK2A3Q8NEV1 391 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 OR5L1Q8NGL2 311 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 KLF14Q8TD94 323 aaPredicted RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 SEC22CQ9BRL7 303 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 FAAP24Q9BTP7 215 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 MOV10Q9HCE1 1003 aaKnown RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 AMY2AP04746 511 aa11.61□□□□□ -0.55
CDC42-202ENST00000344548 GSTP1P09211 210 aaKnown RBP11.61□□□□□ -0.55
CDC42-202ENST00000344548 CXCL3P19876 107 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms