RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 DNASE2BQ8WZ79 361 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 HAS2Q92819 552 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ARSGQ96EG1 525 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 HIST1H2AAQ96QV6 131 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 OR5B12Q96R08 314 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 IMMP2LQ96T52 175 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 MENTQ9BUN1 341 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 OR2J1Q9GZK6 312 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF700Q9H0M5 742 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.19□□□□□ -1.26
ATG4A-201ENST00000343524 FLRT3Q9NZU0 649 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 AK3Q9UIJ7 227 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 C19orf53Q9UNZ5 99 aaPredicted RBP7.19□□□□□ -1.26
ATG4A-201ENST00000343524 HIF3AQ9Y2N7 669 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 NSG1A0A0A6YYJ2 146 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 LINC01553A4QN01 128 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 MASP2O00187 686 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 DIRAS3O95661 229 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 PDGFBP01127 241 aaPredicted RBP7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ISG15P05161 165 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 NGFRP08138 427 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 PGA3P0DJD8 388 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 AMY2BP19961 511 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 KLK2P20151 261 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 CD70P32970 193 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 GATMP50440 423 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ROM1Q03395 351 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 COL10A1Q03692 680 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 KIRREL2Q6UWL6 708 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ADIPOR2Q86V24 386 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ZNF440Q8IYI8 595 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 GCNT2Q8N0V5 402 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 GPR119Q8TDV5 335 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 LIPHQ8WWY8 451 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 NKD1Q969G9 470 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 WBP2Q969T9 261 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ERGIC1Q969X5 290 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 P2RX4Q99571 388 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 RARRES2Q99969 163 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 PYGO2Q9BRQ0 406 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 RTBDNQ9BSG5 229 aaPredicted RBP7.19□□□□□ -1.26
ATG4A-201ENST00000343524 PCGF1Q9BSM1 259 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 ELOVL3Q9HB03 270 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 MSL2Q9HCI7 577 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 GPR84Q9NQS5 396 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 SLC2A4RGQ9NR83 387 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 GRHPRQ9UBQ7 328 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 CGGBP1Q9UFW8 167 aaPredicted RBP7.19□□□□□ -1.26
ATG4A-201ENST00000343524 PLAGL1Q9UM63 463 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 POLR3KQ9Y2Y1 108 aaPredicted RBP7.19□□□□□ -1.26
ATG4A-201ENST00000343524 LIPGQ9Y5X9 500 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 COLEC10Q9Y6Z7 277 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 PTPRSQ13332 1948 aa7.19□□□□□ -1.26
ATG4A-201ENST00000343524 DNAH14Q0VDD8 3507 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 EP300Q09472 2414 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-201ENST00000343524 CEP250Q9BV73 2442 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 A0A087WV48 116 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 TRBV11-1A0A0K0K1C0 115 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 DCDC2BA2VCK2 349 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 CDC14CA4D256 554 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 A6NNC1 897 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 NDUFS8O00217 210 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 ETV2O00321 342 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-201ENST00000343524 PITX3O75364 302 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 CBR3O75828 277 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 TNFSF13O75888 250 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 SCGB1D2O95969 90 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 HPRT1P00492 218 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 LCATP04180 440 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 IRF2P14316 349 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 SFTPDP35247 375 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 CDKN2AP42771 156 aaKnown RBP7.18□□□□□ -1.26
ATG4A-201ENST00000343524 FHITP49789 147 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 RAB7AP51149 207 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 RPL23AP62750 156 aaKnown RBP7.18□□□□□ -1.26
ATG4A-201ENST00000343524 PSG6Q00889 435 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 PRDX1Q06830 199 aaKnown RBP7.18□□□□□ -1.26
ATG4A-201ENST00000343524 SPEM2Q0P670 501 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 ATP6V1FQ16864 119 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 ALG10Q5BKT4 473 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 DPY19L4Q7Z388 723 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 CATSPERDQ86XM0 798 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 CACUL1Q86Y37 369 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 GBGT1Q8N5D6 347 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 C11orf42Q8N5U0 333 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 OR1N1Q8NGS0 311 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 OR2G3Q8NGZ4 309 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 DIRC2Q96SL1 478 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 LMF2Q9BU23 707 aaKnown RBP7.18□□□□□ -1.26
ATG4A-201ENST00000343524 WWTR1Q9GZV5 400 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 Q9N2K0 584 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 LYRM2Q9NU23 88 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-201ENST00000343524 DNAJB12Q9NXW2 375 aaKnown RBP7.18□□□□□ -1.26
ATG4A-201ENST00000343524 SLC5A6Q9Y289 635 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 TICRRQ7Z2Z1 1910 aa7.18□□□□□ -1.26
ATG4A-201ENST00000343524 TRAV1-1A0A0B4J248 108 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 TRAV39A0A0B4J263 110 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 A0A1B0GTH9 108 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 LOC102723971A0A1B0GUV8 181 aa7.17□□□□□ -1.26
ATG4A-201ENST00000343524 NKX6-3A6NJ46 265 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms