RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CPNE4Q96A23 557 aaPredicted RBP13.08□□□□□ -0.32
CLCN1-201ENST00000343257 C5orf63A6NC05 138 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 ONECUT2O95948 504 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 TMEM225BP0DP42 221 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 FCARP24071 287 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 IL2RGP31785 369 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 FOXL2P58012 376 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 FUT7Q11130 342 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 MEX3BQ6ZN04 569 aaKnown RBP13.08□□□□□ -0.32
CLCN1-201ENST00000343257 BEND4Q6ZU67 534 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 DYRK2Q92630 601 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 CYP8B1Q9UNU6 501 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 SMCO3A2RU48 225 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 ZNF724A8MTY0 619 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 H3BML4 177 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 ADH1BP00325 375 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 BTF3P20290 206 aaKnown RBP13.08□□□□□ -0.32
CLCN1-201ENST00000343257 P2RY1P47900 373 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 PRSS12P56730 875 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 ARMC6Q6NXE6 501 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 FBXW12Q6X9E4 464 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 C20orf196Q8IYI0 205 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 TMEM123Q8N131 208 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 MVB12AQ96EY5 273 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 C1orf147Q96MC9 270 aaPredicted RBP13.08□□□□□ -0.32
CLCN1-201ENST00000343257 ZNF581Q9P0T4 197 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 PRODH2Q9UF12 536 aa13.08□□□□□ -0.32
CLCN1-201ENST00000343257 SDK1Q7Z5N4 2213 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 REV3LO60673 3130 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 E5RGE8 158 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 CLPSP04118 112 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 TMEM176BQ3YBM2 270 aaPredicted RBP13.07□□□□□ -0.32
CLCN1-201ENST00000343257 ZNF776Q68DI1 518 aaPredicted RBP13.07□□□□□ -0.32
CLCN1-201ENST00000343257 FAM57BQ71RH2 274 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 LRP11Q86VZ4 500 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 TMEM217Q8N7C4 229 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 OR10S1Q8NGN2 331 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 URM1Q9BTM9 101 aaKnown RBP13.07□□□□□ -0.32
CLCN1-201ENST00000343257 MAGT1Q9H0U3 335 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 PADI1Q9ULC6 663 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 NSG2Q9Y328 171 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 STMND1H3BQB6 276 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 IL33O95760 270 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 ZNF880Q6PDB4 577 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 COMMD1Q8N668 190 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 STT3BQ8TCJ2 826 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 ADAMTS18Q8TE60 1221 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 SLC37A2Q8TED4 501 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 MCTS1Q9ULC4 181 aaKnown RBP13.07□□□□□ -0.32
CLCN1-201ENST00000343257 VDAC3Q9Y277 283 aa13.07□□□□□ -0.32
CLCN1-201ENST00000343257 HSD17B6O14756 317 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 OR1D4P47884 311 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 RUNX1Q01196 453 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 ABCA11PQ4W5N1 156 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 PLEKHA2Q9HB19 425 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 AK3Q9UIJ7 227 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 ZNF850A8MQ14 1090 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 MMP9P14780 707 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 OR11L1Q8NGX0 322 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.06□□□□□ -0.32
CLCN1-201ENST00000343257 PIGTQ969N2 578 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 BMFQ96LC9 184 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 GINS3Q9BRX5 216 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 LIME1Q9H400 295 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 SLC7A11Q9UPY5 501 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 MYO9BQ13459 2157 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 NSG1A0A0A6YYJ2 146 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 SCGNO76038 276 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 DXOO77932 396 aaKnown RBP13.06□□□□□ -0.32
CLCN1-201ENST00000343257 MMP16P51512 607 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 BIDP55957 195 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 TAS2R46P59540 309 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 RUNX3Q13761 415 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 THAP3Q8WTV1 239 aaPredicted RBP13.06□□□□□ -0.32
CLCN1-201ENST00000343257 RNF133Q8WVZ7 376 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 FAM210BQ96KR6 192 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 PECRQ9BY49 303 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 DUSP15Q9H1R2 295 aaPredicted RBP13.06□□□□□ -0.32
CLCN1-201ENST00000343257 KCNIP3Q9Y2W7 256 aa13.06□□□□□ -0.32
CLCN1-201ENST00000343257 EREGO14944 169 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 GPR137BO60478 399 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 TUBG1P23258 451 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 ATP6V0CP27449 155 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 ZNF121P58317 390 aaPredicted RBP13.05□□□□□ -0.32
CLCN1-201ENST00000343257 SPCS3P61009 180 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 OR8B12Q8NGG6 310 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 PTPMT1Q8WUK0 201 aaPredicted RBP13.05□□□□□ -0.32
CLCN1-201ENST00000343257 HPSE2Q8WWQ2 592 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 GPHA2Q96T91 129 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 RER1O15258 196 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 CST7O76096 145 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 PTBP3O95758 552 aaKnown RBP13.05□□□□□ -0.32
CLCN1-201ENST00000343257 LINC00271P0C7V0 271 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 OR5H8P0DN80 308 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 PGCP20142 388 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 MFAP5Q13361 173 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 PDCD1Q15116 288 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 BATF2Q8N1L9 274 aa13.05□□□□□ -0.32
CLCN1-201ENST00000343257 KDF1Q8NAX2 398 aaPredicted RBP13.05□□□□□ -0.32
CLCN1-201ENST00000343257 HIST1H2BLQ99880 126 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms