RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PRO1933Q9H354 126 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 COA3Q9Y2R0 106 aaPredicted RBP15.92■□□□□ 0.14
SMAD4-201ENST00000342988 POM121BA6NF01 834 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 CST5P28325 142 aaPredicted RBP15.92■□□□□ 0.14
SMAD4-201ENST00000342988 FAM53AQ6NSI3 398 aaPredicted RBP15.92■□□□□ 0.14
SMAD4-201ENST00000342988 PP6455Q8WZ26 134 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 RDH5Q92781 318 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 COL6A6A6NMZ7 2263 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 CDX4O14627 284 aaPredicted RBP15.92■□□□□ 0.14
SMAD4-201ENST00000342988 MAMSTRQ6ZN01 415 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 CHST2Q9Y4C5 530 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 CRYABP02511 175 aaKnown RBP15.92■□□□□ 0.14
SMAD4-201ENST00000342988 HOXC4P09017 264 aaPredicted RBP15.92■□□□□ 0.14
SMAD4-201ENST00000342988 FURINP09958 794 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 ARRB2P32121 409 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 LYZP61626 148 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 SPANXN1Q5VSR9 72 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 PPIAP62937 165 aaKnown RBP15.92■□□□□ 0.14
SMAD4-201ENST00000342988 NHLRC1Q6VVB1 395 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 KMT5CQ86Y97 462 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 TMEM140Q9NV12 185 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 OR51B4Q9Y5P0 310 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 MBTPS2O43462 519 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 TMEM25Q86YD3 366 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 VSTM2AQ8TAG5 236 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 PIK3IP1Q96FE7 263 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 KAZALD1Q96I82 304 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 S1PR5Q9H228 398 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 TECRQ9NZ01 308 aaKnown RBP15.92■□□□□ 0.14
SMAD4-201ENST00000342988 CACNG5Q9UF02 275 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 LIPGQ9Y5X9 500 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 PAM16Q9Y3D7 125 aa15.92■□□□□ 0.14
SMAD4-201ENST00000342988 AKR7A3O95154 331 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 ARRDC1Q8N5I2 433 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 TMEM38BQ9NVV0 291 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 C1RLQ9NZP8 487 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 FAM181BA6NEQ2 426 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 VWA2Q5GFL6 755 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 ST8SIA1Q92185 356 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 TCF21O43680 179 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 ZNF841Q6ZN19 808 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 ADPRHL1Q8NDY3 354 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 OR10G8Q8NGN5 311 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 SIRT5Q9NXA8 310 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 MAP1LC3B2A6NCE7 125 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 LINC01387J3KSC0 135 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 GSTZ1O43708 216 aaPredicted RBP15.91■□□□□ 0.14
SMAD4-201ENST00000342988 C6orf15Q6UXA7 325 aaPredicted RBP15.91■□□□□ 0.14
SMAD4-201ENST00000342988 ZDHHC22Q8N966 263 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 SPPL3Q8TCT6 385 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 RASL11BQ9BPW5 248 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 MAP1LC3BQ9GZQ8 125 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 JKAMPQ9P055 326 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 DOCK2Q92608 1830 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 SALL3Q9BXA9 1300 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 OR8I2Q8N0Y5 310 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 OR2W1Q9Y3N9 320 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 ID4P47928 161 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 CLPPQ16740 277 aaPredicted RBP15.91■□□□□ 0.14
SMAD4-201ENST00000342988 ZNF541Q9H0D2 1346 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 H3BNC9 293 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 PELI3Q8N2H9 469 aa15.91■□□□□ 0.14
SMAD4-201ENST00000342988 APOBEC3DQ96AK3 386 aaPredicted RBP15.91■□□□□ 0.14
SMAD4-201ENST00000342988 COL14A1Q05707 1796 aaKnown RBP15.9■□□□□ 0.14
SMAD4-201ENST00000342988 FITM1A5D6W6 292 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 FECHP22830 423 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 AESQ08117 197 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 COL19A1Q14993 1142 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 PARM1Q6UWI2 310 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 RNF39Q9H2S5 420 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 B4E171 279 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 LGALS3P17931 250 aaKnown RBP15.9■□□□□ 0.14
SMAD4-201ENST00000342988 TMEM229BQ8NBD8 167 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 OR13G1Q8NGZ3 307 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 DUSP21Q9H596 190 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 PFN4Q8NHR9 129 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 MSL2Q9HCI7 577 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 PRDM7Q9NQW5 492 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 TSPAN12O95859 305 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 OR51E1Q8TCB6 317 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 OXGR1Q96P68 337 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 CACNA1EQ15878 2313 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 DUSP5Q16690 384 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 SMUG1Q53HV7 270 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 FAM78BQ5VT40 261 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 NANOGP1Q8N7R0 232 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 Q8WTZ3 238 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 CSN3P07498 182 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 UBE2L3P68036 154 aaKnown RBP15.9■□□□□ 0.14
SMAD4-201ENST00000342988 HSF5Q4G112 596 aaPredicted RBP15.9■□□□□ 0.14
SMAD4-201ENST00000342988 KCNMB2Q9Y691 235 aa15.9■□□□□ 0.14
SMAD4-201ENST00000342988 CASP8AP2Q9UKL3 1982 aa15.89■□□□□ 0.14
SMAD4-201ENST00000342988 SIRT7Q9NRC8 400 aa15.89■□□□□ 0.13
SMAD4-201ENST00000342988 PPIHO43447 177 aaKnown RBP15.89■□□□□ 0.13
SMAD4-201ENST00000342988 GPX5O75715 221 aa15.89■□□□□ 0.13
SMAD4-201ENST00000342988 ACAA1P09110 424 aaPredicted RBP15.89■□□□□ 0.13
SMAD4-201ENST00000342988 FAM157BP0CG42 384 aa15.89■□□□□ 0.13
SMAD4-201ENST00000342988 HLA-GP17693 338 aa15.89■□□□□ 0.13
SMAD4-201ENST00000342988 LIPAP38571 399 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms