RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 UQCC3Q6UW78 93 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 SLC36A1Q7Z2H8 476 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 LDLRAD3Q86YD5 345 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 CPT1CQ8TCG5 803 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 MVB12AQ96EY5 273 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 PIGQQ9BRB3 760 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 GJE1A6NN92 205 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 EFEMP2O95967 443 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 CST4P01036 141 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 IGHV4-34P06331 123 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 FGF2P09038 288 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 MUC1P15941 1255 aaPredicted RBP11□□□□□ -0.65
SNRNP48-201ENST00000342415 MEOX2P50222 304 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 CCR5P51681 352 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 DRAM2Q6UX65 266 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 DPPA2Q7Z7J5 298 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 PHYHIPLQ96FC7 376 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 RAB18Q9NP72 206 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 LPAR3Q9UBY5 353 aa11□□□□□ -0.65
SNRNP48-201ENST00000342415 MPTX1A8MV57 137 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 IFNA1P01562 189 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 ECH1Q13011 328 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 AWAT1Q58HT5 328 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 CST9LP1Q5W188 147 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 RTL6Q6ICC9 239 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 Q7L0L9 218 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 ARHGEF39Q8N4T4 335 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 MRGPRX4Q96LA9 322 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 C12orf49Q9H741 205 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 R4GN57 208 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 A0A1W2PPE2 198 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF705FA8MVS1 300 aaPredicted RBP10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 CYB5BO43169 146 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 SCAF4O95104 1147 aaKnown RBP10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF705DP0CH99 300 aaPredicted RBP10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF705BP0CI00 300 aaPredicted RBP10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 MECP2P51608 486 aaKnown RBP10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF133P52736 654 aaPredicted RBP10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 RAB4BP61018 213 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 SPANXN5Q5MJ07 72 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 ABHD17BQ5VST6 288 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF774Q6NX45 483 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 WDR5BQ86VZ2 330 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF561Q8N587 486 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 ASB10Q8WXI3 467 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 TIMP4Q99727 224 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 PPP1R3CQ9UQK1 317 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 NOSIPQ9Y314 301 aaKnown RBP10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 BDP1A6H8Y1 2624 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 SOX15O60248 233 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 HAAOP46952 286 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 LYZL2Q7Z4W2 148 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 PLPPR2Q96GM1 343 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 RTN4RQ9BZR6 473 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 SHARPINQ9H0F6 387 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 MOB1AQ9H8S9 216 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 SLC39A9Q9NUM3 307 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 SIT1Q9Y3P8 196 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 NLRC5Q86WI3 1866 aa10.99□□□□□ -0.65
SNRNP48-201ENST00000342415 TRBV5-7A0A0A0MS05 114 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 MSGN1A6NI15 193 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 ANKRD30BLA7E2S9 258 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 FAM166BA8MTA8 275 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 EIF1BO60739 113 aaKnown RBP10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 ZBTB25P24278 435 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 POLR2GP62487 172 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 VOPP1Q96AW1 172 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 OR10C1Q96KK4 312 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 UCN2Q96RP3 112 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 WDR13Q9H1Z4 485 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 LILRA5A6NI73 299 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 LYPD3O95274 346 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 FABP1P07148 127 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 GLB1P16278 677 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 CEACAM16Q2WEN9 425 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 DEGS2Q6QHC5 323 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 RPS4Y2Q8TD47 263 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 MESP1Q9BRJ9 268 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 ALX4Q9H161 411 aaPredicted RBP10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 C19orf12Q9NSK7 152 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 RALGAPA1Q6GYQ0 2036 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 TCN2P20062 427 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 HMGN3Q15651 99 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF260Q3ZCT1 412 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 IL34Q6ZMJ4 242 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 OR8U1Q8NH10 309 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 ZNF721Q8TF20 911 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 RPUSD4Q96CM3 377 aaKnown RBP10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 PLEKHA2Q9HB19 425 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 LAMA3Q16787 3333 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 IGKV1D-43A0A0B4J1Z2 117 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 C7orf77A4D0Y5 90 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 SERPINE3A8MV23 424 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 EIF3GO75821 320 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 PIAS2O75928 621 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 MPGP29372 298 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 MMP16P51512 607 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 TLE4Q04727 773 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 FZD5Q13467 585 aa10.98□□□□□ -0.65
SNRNP48-201ENST00000342415 C9orf152Q5JTZ5 239 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms