RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 TMEM216Q9P0N5 145 aa8.22□□□□□ -1.09
ATXN3-201ENST00000340660 C11orf21Q9P2W6 132 aa8.22□□□□□ -1.09
ATXN3-201ENST00000340660 FIS1Q9Y3D6 152 aa8.22□□□□□ -1.09
ATXN3-201ENST00000340660 KPNA4O00629 521 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-201ENST00000340660 RRP9O43818 475 aaKnown RBP8.21□□□□□ -1.1
ATXN3-201ENST00000340660 LYPD3O95274 346 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 SMR3BP02814 79 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-201ENST00000340660 HIST1H2ABP04908 130 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 TMEM11P17152 192 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 CRISP3P54108 245 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 MFAP2P55001 183 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 ROM1Q03395 351 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 DEFB135Q30KP9 77 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 TPTE2P1Q5T6R2 138 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 CCDC80Q76M96 950 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 HIST3H2AQ7L7L0 130 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 CPLX4Q7Z7G2 160 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 CD177Q8N6Q3 437 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 MOSPD2Q8NHP6 518 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 C11orf45Q8TAV5 145 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 UBALD1Q8TB05 177 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 SLC38A5Q8WUX1 472 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 RPL3LQ92901 407 aaKnown RBP8.21□□□□□ -1.1
ATXN3-201ENST00000340660 HIST1H2ACQ93077 130 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 TMEM133Q9H2Q1 129 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 SP140LQ9H930 580 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 ETAA1Q9NY74 926 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 IFT52Q9Y366 437 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 SESN1Q9Y6P5 492 aa8.21□□□□□ -1.1
ATXN3-201ENST00000340660 IGHV4-4A0A075B6R2 117 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 LEUTXA8MZ59 168 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 PGRMC1O00264 195 aaKnown RBP8.2□□□□□ -1.1
ATXN3-201ENST00000340660 DNAJC8O75937 253 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-201ENST00000340660 LCATP04180 440 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 CLNS1AP54105 237 aaKnown RBP8.2□□□□□ -1.1
ATXN3-201ENST00000340660 BDH1Q02338 343 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 SMN1Q16637 294 aaKnown RBP8.2□□□□□ -1.1
ATXN3-201ENST00000340660 SLC22A9Q8IVM8 553 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 NKAIN4Q8IVV8 208 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 ZNF676Q8N7Q3 588 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 OR56B4Q8NH76 319 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 HSPB9Q9BQS6 159 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 C1orf21Q9H246 121 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 DPH5Q9H2P9 285 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 CALML5Q9NZT1 146 aa8.2□□□□□ -1.1
ATXN3-201ENST00000340660 PRSS51A0A1B0GVH4 220 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 NPIPB13A6NJU9 1138 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 NPIPB4C9JG80 1138 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 H3BQF6 201 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 LY6LH3BQJ8 138 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 PEX11AO75192 247 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 TIPRLO75663 272 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 MMP23AO75900 390 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 LGALS1P09382 135 aaKnown RBP8.19□□□□□ -1.1
ATXN3-201ENST00000340660 P0DMU3 169 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 FAM231AP0DMU4 169 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 FAM231CP0DMU5 169 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 PPIFP30405 207 aaKnown RBP8.19□□□□□ -1.1
ATXN3-201ENST00000340660 ANP32AP39687 249 aaKnown RBP8.19□□□□□ -1.1
ATXN3-201ENST00000340660 RAB9AP51151 201 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 TXNL4AP83876 142 aaKnown RBP8.19□□□□□ -1.1
ATXN3-201ENST00000340660 HES1Q14469 280 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 SNAI3Q3KNW1 292 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 TMEM139Q8IV31 216 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 OR8J2Q8NGG1 315 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 NFKBIDQ8NI38 313 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 SGTBQ96EQ0 304 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 C16orf92Q96LL3 132 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 SLA2Q9H6Q3 261 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 TMEM27Q9HBJ8 222 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 SLC2A8Q9NY64 477 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 PYCARDQ9ULZ3 195 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 DNAJC15Q9Y5T4 150 aa8.19□□□□□ -1.1
ATXN3-201ENST00000340660 F5H5K5 113 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 H7C1C5 153 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 EIF3HO15372 352 aaKnown RBP eCLIP8.18□□□□□ -1.1
ATXN3-201ENST00000340660 IGLV1-47P01700 117 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 GLRA1P23415 457 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 MNDAP41218 407 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 LCN6P62502 163 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 HIST1H3AP68431 136 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 ADARB1P78563 741 aaKnown RBP8.18□□□□□ -1.1
ATXN3-201ENST00000340660 CASP8Q14790 479 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 TIGD6Q17RP2 521 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 GLYATL3Q5SZD4 288 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 HIST2H3PS2Q5TEC6 136 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 ZBTB49Q6ZSB9 765 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 Q6ZWC4 215 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 HIST2H3AQ71DI3 136 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 FNDC8Q8TC99 324 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 ZBTB9Q96C00 473 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 MNTQ99583 582 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 HDHD2Q9H0R4 259 aa8.18□□□□□ -1.1
ATXN3-201ENST00000340660 CACYBPQ9HB71 228 aaKnown RBP8.18□□□□□ -1.1
ATXN3-201ENST00000340660 MRPS28Q9Y2Q9 187 aaKnown RBP8.18□□□□□ -1.1
ATXN3-201ENST00000340660 LOC102724200A0A096LPH7 203 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-201ENST00000340660 A0A0G2JPF8 293 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 OR6C68A6NDL8 312 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 ARRDC5A6NEK1 342 aa8.17□□□□□ -1.1
ATXN3-201ENST00000340660 ZNF785A8K8V0 405 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms