RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 CCL11P51671 97 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 UBE2G1P62253 170 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 IRF3Q14653 427 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 Q5BKY6 102 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 BTNL8Q6UX41 500 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 ASB13Q8WXK3 278 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 GNPNAT1Q96EK6 184 aaPredicted RBP7.78□□□□□ -1.16
RTN3-202ENST00000339997 ADGRG7Q96K78 797 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 RAB18Q9NP72 206 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 SLC35D1Q9NTN3 355 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 ZNF586Q9NXT0 402 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 BOKQ9UMX3 212 aaPredicted RBP7.78□□□□□ -1.16
RTN3-202ENST00000339997 SIRT4Q9Y6E7 314 aaPredicted RBP7.78□□□□□ -1.16
RTN3-202ENST00000339997 TRPM6Q9BX84 2022 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 A0A0A6YYD5 115 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 KIR2DS1A0A191URI9 304 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 FAM74A7A6NL05 159 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 HSBP1O75506 76 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 KIR2DS4P43632 304 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 PPICP45877 212 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 GPM6AP51674 278 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 TCL1AP56279 114 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 ERVFC1-1P60608 527 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 YPEL5P62699 121 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 KIR2DS1Q14954 304 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 ZNF77Q15935 545 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 TIGITQ495A1 244 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 FAM74A3Q4VXF1 159 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 TMEM215Q68D42 235 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 DRAM2Q6UX65 266 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 ZAR1Q86SH2 424 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 RPP25Q9BUL9 199 aaKnown RBP7.78□□□□□ -1.16
RTN3-202ENST00000339997 TRAV8-7A0A075B6U6 113 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 TMEM218A2RU14 115 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 C9orf170A2RU37 121 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 TNFSF11O14788 317 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 GEMIN2O14893 280 aaKnown RBP7.78□□□□□ -1.16
RTN3-202ENST00000339997 C1QL1O75973 258 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 CNIH1O95406 144 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 GYPAP02724 150 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 CT45A10P0DMU9 189 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 EFNB2P52799 333 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 C19orf57Q0VDD7 668 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 GUCA2BQ16661 112 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 MRGPREQ86SM8 312 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 BVESQ8NE79 360 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 ELOVL1Q9BW60 279 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 MFRPQ9BY79 579 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 CNTD2Q9H8S5 307 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 MMP25Q9NPA2 562 aa7.78□□□□□ -1.16
RTN3-202ENST00000339997 A0A087X0M5 115 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 A0A1B0GX30 115 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 HRKO00198 91 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 MBTPS2O43462 519 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 OR2J3O76001 311 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 DTYMKP23919 212 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 EGR3Q06889 387 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 ZNF718Q3SXZ3 478 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 CYB5R2Q6BCY4 276 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 PWWP2BQ6NUJ5 590 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 DUSP18Q8NEJ0 188 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 OR10G3Q8NGC4 313 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 C4orf45Q96LM5 186 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 UTP23Q9BRU9 249 aaKnown RBP7.77□□□□□ -1.17
RTN3-202ENST00000339997 RIMS4Q9H426 269 aaPredicted RBP7.77□□□□□ -1.17
RTN3-202ENST00000339997 ZNF835Q9Y2P0 537 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 CENPVL1A0A0U1RR11 272 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 XKRY2A2RUG3 117 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 ADAM20O43506 726 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 EIF1BO60739 113 aaKnown RBP7.77□□□□□ -1.17
RTN3-202ENST00000339997 ADH4P08319 380 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 OR5AC1P0C628 307 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 MPV17LQ2QL34 196 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 ZNF547Q8IVP9 402 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 OR2L13Q8N349 312 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 DTWD2Q8NBA8 298 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 WFDC6Q9BQY6 131 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 PLEKHA2Q9HB19 425 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 OPN4Q9UHM6 478 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 ASPMQ8IZT6 3477 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 CDC14BO60729 498 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 ITGBL1O95965 494 aaPredicted RBP7.77□□□□□ -1.17
RTN3-202ENST00000339997 MRPL58Q14197 206 aaKnown RBP7.77□□□□□ -1.17
RTN3-202ENST00000339997 KISS1Q15726 138 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 DCAF12L2Q5VW00 463 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 RFLNBQ8N5W9 214 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 OR11L1Q8NGX0 322 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 IFI44Q8TCB0 444 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 ACY3Q96HD9 319 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 MRGPRX1Q96LB2 322 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 PECRQ9BY49 303 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 OBP2AQ9NY56 170 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 ERRFI1Q9UJM3 462 aaPredicted RBP7.77□□□□□ -1.17
RTN3-202ENST00000339997 FZR1Q9UM11 496 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 KCNE1BA0A087WTH5 132 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 A0A0B4J2E0 115 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 A0A1B0GX12 115 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 ABCD4O14678 606 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 ARPC3O15145 178 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 WNT11O96014 354 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms