RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 HIST1H1DP16402 221 aaKnown RBP10.52□□□□□ -0.72
USP1-201ENST00000339950 ANOS1P23352 680 aa10.52□□□□□ -0.72
USP1-201ENST00000339950 SMAD4Q13485 552 aaKnown RBP10.52□□□□□ -0.72
USP1-201ENST00000339950 TMEM182Q6ZP80 229 aaPredicted RBP10.52□□□□□ -0.72
USP1-201ENST00000339950 MAFAQ8NHW3 353 aaPredicted RBP10.52□□□□□ -0.72
USP1-201ENST00000339950 OR2A7Q96R45 310 aa10.52□□□□□ -0.72
USP1-201ENST00000339950 G6PC2Q9NQR9 355 aa10.52□□□□□ -0.72
USP1-201ENST00000339950 LHFPL6Q9Y693 200 aa10.52□□□□□ -0.72
USP1-201ENST00000339950 HMGB3O15347 200 aaKnown RBP10.52□□□□□ -0.73
USP1-201ENST00000339950 PET100P0DJ07 73 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 MECP2P51608 486 aaKnown RBP10.52□□□□□ -0.73
USP1-201ENST00000339950 HAGHQ16775 308 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 CEACAM16Q2WEN9 425 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 APCDD1LQ8NCL9 501 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 UNKLQ9H9P5 680 aaKnown RBP10.52□□□□□ -0.73
USP1-201ENST00000339950 ANKUB1A6NFN9 424 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 HLA-HP01893 362 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 MSR1P21757 451 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 PTGFRP43088 359 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 THEM4Q5T1C6 240 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 NOXO1Q8NFA2 376 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 IFI44Q8TCB0 444 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 MRPL24Q96A35 216 aaKnown RBP10.52□□□□□ -0.73
USP1-201ENST00000339950 MRPS24Q96EL2 167 aaKnown RBP10.52□□□□□ -0.73
USP1-201ENST00000339950 SCGB3A2Q96PL1 93 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 MTCH2Q9Y6C9 303 aa10.52□□□□□ -0.73
USP1-201ENST00000339950 A0A0U1RQK1 487 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 A6NLC8 198 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 ABCD4O14678 606 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 EFNA2O43921 213 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 IGHV3-13P01766 116 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 IGHV3-7P01780 117 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 ITGB2P05107 769 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 ZNF728P0DKX0 622 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 G0S2P27469 103 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 IZUMO4Q1ZYL8 232 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 ASPHD2Q6ICH7 369 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 IL22RA1Q8N6P7 574 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 GJC3Q8NFK1 279 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 OR6S1Q8NH40 331 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 HPSE2Q8WWQ2 592 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 NDRG3Q9UGV2 375 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 PADI1Q9ULC6 663 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 DHHO43323 396 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 MSX1P28360 303 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 RPL12P30050 165 aaKnown RBP10.51□□□□□ -0.73
USP1-201ENST00000339950 LY6G6FQ5SQ64 297 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 PUSL1Q8N0Z8 303 aaKnown RBP10.51□□□□□ -0.73
USP1-201ENST00000339950 LIPHQ8WWY8 451 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 SHDQ96IW2 340 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 SLC25A32Q9H2D1 315 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 GFOD1Q9NXC2 390 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 ST3GAL6Q9Y274 331 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 FLVCR1Q9Y5Y0 555 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 NPTNQ9Y639 398 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 A0A1W2PQM1 296 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 GEMIN2O14893 280 aaKnown RBP10.51□□□□□ -0.73
USP1-201ENST00000339950 ZNF32P17041 273 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 SSR4P51571 173 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 PPIAP62937 165 aaKnown RBP10.51□□□□□ -0.73
USP1-201ENST00000339950 PLAC9Q5JTB6 97 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 SOHLH1Q5JUK2 328 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 ZNF695Q8IW36 515 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 TDHQ8IZJ6 230 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 OR6K3Q8NGY3 331 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 ZNF519Q8TB69 540 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 ST8SIA1Q92185 356 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 GPX7Q96SL4 187 aaPredicted RBP10.51□□□□□ -0.73
USP1-201ENST00000339950 FAM234AQ9H0X4 552 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 LPAR5Q9H1C0 372 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 TLNRD1Q9H1K6 362 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 TUBG2Q9NRH3 451 aa10.51□□□□□ -0.73
USP1-201ENST00000339950 hCG_1809904A0A1W2PP81 198 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 A0A1W2PR64 198 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 A0A1W2PRV1 198 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 MBTPS2O43462 519 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 OR2F2O95006 317 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 CRHP06850 196 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 BMP5P22003 454 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 OR2F1Q13607 317 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 GNMTQ14749 295 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 ANKRD55Q3KP44 614 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 TMEM128Q5BJH2 165 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 ZNF684Q5T5D7 378 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 SPINK14Q6IE38 97 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 ZFP62Q8NB50 900 aaPredicted RBP10.5□□□□□ -0.73
USP1-201ENST00000339950 SUMF2Q8NBJ7 301 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 ABHD3Q8WU67 409 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 RNF133Q8WVZ7 376 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 RHOFQ9HBH0 211 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 TSTD3H0UI37 97 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 PHOX2AO14813 284 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 CYTIPO60759 359 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 SNAPC5O75971 98 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 CYCSP99999 105 aaKnown RBP10.5□□□□□ -0.73
USP1-201ENST00000339950 ZNF260Q3ZCT1 412 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 RTN4IP1Q8WWV3 396 aaPredicted RBP10.5□□□□□ -0.73
USP1-201ENST00000339950 ZNF488Q96MN9 340 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 CNTNAP3Q9BZ76 1288 aa10.5□□□□□ -0.73
USP1-201ENST00000339950 RFNGQ9Y644 331 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms