RNA–Protein interactions for RNA: ENST00000339859.8

USP54-201, Transcript of ubiquitin specific peptidase 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP54, Length 6,247 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-201ENST00000339859 GNG10P50151 68 aa8.89□□□□□ -0.99
USP54-201ENST00000339859 GFRA1P56159 465 aa8.89□□□□□ -0.99
USP54-201ENST00000339859 ZBTB37Q5TC79 503 aa8.89□□□□□ -0.99
USP54-201ENST00000339859 SLC38A6Q8IZM9 456 aa8.89□□□□□ -0.99
USP54-201ENST00000339859 PTDSS2Q9BVG9 487 aa8.89□□□□□ -0.99
USP54-201ENST00000339859 OR51J1Q9H342 316 aa8.89□□□□□ -0.99
USP54-201ENST00000339859 KCNIP2Q9NS61 270 aa8.89□□□□□ -0.99
USP54-201ENST00000339859 TFP02787 698 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 RFX2P48378 723 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 HBG1P69891 147 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 HBG2P69892 147 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 ZNF85Q03923 595 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 C10orf111Q8N326 155 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 OR51H1Q8NH63 302 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 OCEL1Q9H607 264 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 PURGQ9UJV8 347 aaKnown RBP8.88□□□□□ -0.99
USP54-201ENST00000339859 OR5H1A6NKK0 313 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 C1QTNF9BB2RNN3 333 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 M0QZ24 198 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 SS18L1O75177 396 aaPredicted RBP8.88□□□□□ -0.99
USP54-201ENST00000339859 C1QTNF9P0C862 333 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 CT45A6P0DMU7 189 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 CT45A5P0DMU8 189 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 CT45A7P0DMV0 189 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 GP2P55259 537 aaKnown RBP8.88□□□□□ -0.99
USP54-201ENST00000339859 ERHP84090 104 aaKnown RBP8.88□□□□□ -0.99
USP54-201ENST00000339859 CT45A1Q5HYN5 189 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 OR56B4Q8NH76 319 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 CT45A3Q8NHU0 189 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 HEYLQ9NQ87 328 aaPredicted RBP8.88□□□□□ -0.99
USP54-201ENST00000339859 FAM221AA4D161 298 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 OR8U9P0C7N5 309 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 SCAND1P57086 179 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 RPS4XP62701 263 aaKnown RBP8.88□□□□□ -0.99
USP54-201ENST00000339859 NAA50Q9GZZ1 169 aaKnown RBP8.88□□□□□ -0.99
USP54-201ENST00000339859 LY6G6EA0A0G2JKS1 128 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 J3QW42 95 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 F2RL2O00254 374 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 BCL3P20749 454 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 BMI1P35226 326 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 PDLIM3Q53GG5 364 aaPredicted RBP8.88□□□□□ -0.99
USP54-201ENST00000339859 FAM76BQ5HYJ3 339 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 ZNF626Q68DY1 528 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 OR51A4Q8NGJ6 313 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 U3KQA8 63 aa8.88□□□□□ -0.99
USP54-201ENST00000339859 IGLV3-32A0A0A0MS00 114 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 NPIPB13A6NJU9 1138 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 NPIPB4C9JG80 1138 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 H3BMH7 237 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 NEURL1O76050 574 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 PSMB1P20618 241 aaKnown RBP8.87□□□□□ -0.99
USP54-201ENST00000339859 DCTDP32321 178 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 OR3A4PP47883 348 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 LIMS1P48059 325 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 OR10A3P58181 314 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 VWA1Q6PCB0 445 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.87□□□□□ -0.99
USP54-201ENST00000339859 SNRNP40Q96DI7 357 aaKnown RBP8.87□□□□□ -0.99
USP54-201ENST00000339859 SEH1LQ96EE3 360 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 COMMD5Q9GZQ3 224 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 ZMIZ1Q9ULJ6 1067 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 OOEPA6NGQ2 149 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 NDUFA2O43678 99 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 SCAF4O95104 1147 aaKnown RBP8.87□□□□□ -0.99
USP54-201ENST00000339859 LHX2P50458 406 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 OR10V1Q8NGI7 309 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 DPCDQ9BVM2 203 aaPredicted RBP8.87□□□□□ -0.99
USP54-201ENST00000339859 ANAPC1Q9H1A4 1944 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 PRSS23O95084 383 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 ELK1P19419 428 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 FCGR2CP31995 323 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 CAMLGP49069 296 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 LSAMPQ13449 338 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 SIAH3Q8IW03 269 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 SLC35E1Q96K37 410 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 MS4A7Q9GZW8 240 aaPredicted RBP8.87□□□□□ -0.99
USP54-201ENST00000339859 RAB27BO00194 218 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 AKR7A2O43488 359 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 ADRB1P08588 477 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 PLA2G5P39877 138 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 CLDN18P56856 261 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 NMNAT2Q9BZQ4 307 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 SLC25A10Q9UBX3 287 aaPredicted RBP8.87□□□□□ -0.99
USP54-201ENST00000339859 A0A0U1RQV5 110 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 TMEM235A6NFC5 223 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 CDIPTO14735 213 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 EPXP11678 715 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 TDGF1P13385 188 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 AADACP22760 399 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 CD80P33681 288 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 ALDH3B2P48448 385 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 ACSM1Q08AH1 577 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 MUC15Q8N387 334 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 NEU4Q8WWR8 484 aaPredicted RBP8.87□□□□□ -0.99
USP54-201ENST00000339859 MSL2Q9HCI7 577 aa8.87□□□□□ -0.99
USP54-201ENST00000339859 CDRT15L2A8MXV6 281 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 PDCD6O75340 191 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 ZFPL1O95159 310 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 TGM1P22735 817 aa8.86□□□□□ -0.99
USP54-201ENST00000339859 C10orf128Q5T292 105 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms