RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 NOTCH3Q9UM47 2321 aa11.54□□□□□ -0.56
COMMD4-202ENST00000338995 VGLL3A8MV65 326 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 SELENOFO60613 162 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 ZNF254O75437 659 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 NRASP01111 189 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 PRB2P02812 416 aaPredicted RBP11.53□□□□□ -0.56
COMMD4-202ENST00000338995 ALOX5APP20292 161 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 COX7A1P24310 79 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 BMXP51813 675 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 ACTR3P61158 418 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 GINS1Q14691 196 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 CNN3Q15417 329 aaKnown RBP11.53□□□□□ -0.56
COMMD4-202ENST00000338995 HIST2H2BDQ6DRA6 164 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 CPOQ8IVL8 374 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 POC1AQ8NBT0 407 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 OR13D1Q8NGV5 346 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 AJUBAQ96IF1 538 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 NIPSNAP1Q9BPW8 284 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 YIPF3Q9GZM5 350 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 ARL8BQ9NVJ2 186 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 ARL2BPQ9Y2Y0 163 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 TBL2Q9Y4P3 447 aaKnown RBP11.53□□□□□ -0.56
COMMD4-202ENST00000338995 TMEM14AQ9Y6G1 99 aa11.53□□□□□ -0.56
COMMD4-202ENST00000338995 PRKDCP78527 4128 aaKnown RBP11.52□□□□□ -0.56
COMMD4-202ENST00000338995 ARRDC5A6NEK1 342 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 E2F6O75461 281 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 NXPH2O95156 264 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 CST1P01037 141 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 RAP2AP10114 183 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 HOXB6P17509 224 aaKnown RBP11.52□□□□□ -0.57
COMMD4-202ENST00000338995 ATP6V1B2P21281 511 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 OR12D2P58182 307 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 TRIM25Q14258 630 aaKnown RBP11.52□□□□□ -0.57
COMMD4-202ENST00000338995 ZNF829Q3KNS6 432 aaPredicted RBP11.52□□□□□ -0.57
COMMD4-202ENST00000338995 OXLD1Q5BKU9 147 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 CD177Q8N6Q3 437 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 OR4M1Q8NGD0 313 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 ASB17Q8WXJ9 295 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 FGF23Q9GZV9 251 aaPredicted RBP11.52□□□□□ -0.57
COMMD4-202ENST00000338995 PBOV1Q9GZY1 135 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 PIGLQ9Y2B2 252 aa11.52□□□□□ -0.57
COMMD4-202ENST00000338995 TCRBV5S2A0A599 114 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 B2RBV5 119 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 J3QT63 122 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 NOS1APO75052 506 aaPredicted RBP11.51□□□□□ -0.57
COMMD4-202ENST00000338995 ARG1P05089 322 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 HAAOP46952 286 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 RIDAP52758 137 aaKnown RBP11.51□□□□□ -0.57
COMMD4-202ENST00000338995 CLVS2Q5SYC1 327 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 LCN8Q6JVE9 175 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 Q8N2B8 174 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 OR51E1Q8TCB6 317 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 PIFOQ8TCI5 191 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 GPR84Q9NQS5 396 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 TCF19Q9Y242 345 aa11.51□□□□□ -0.57
COMMD4-202ENST00000338995 FAM90A8PA6NJQ4 464 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 CHST1O43916 411 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 DHRS3O75911 302 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 TK1P04183 234 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 PGA5P0DJD9 388 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 CD28P10747 220 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 OSMP13725 252 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 CD33P20138 364 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 ESRRGP62508 458 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 GNGT1P63211 74 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 SSX2Q16385 188 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 TRPM8Q7Z2W7 1104 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 ZNF679Q8IYX0 411 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 LYG1Q8N1E2 194 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 C11orf42Q8N5U0 333 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 NSL1Q96IY1 281 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 CHID1Q9BWS9 393 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 MMP28Q9H239 520 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 ZNF702PQ9H963 129 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 SERTAD4Q9NUC0 356 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 VNN3Q9NY84 501 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 OR14J1Q9UGF5 321 aa11.5□□□□□ -0.57
COMMD4-202ENST00000338995 MEGF11A6BM72 1044 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 DLGAP1O14490 977 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 RBP4P02753 201 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 CHRM2P08172 466 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 ZNF728P0DKX0 622 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 ANXA8P13928 327 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 CCL3L1P16619 93 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 PAX6P26367 422 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 RAB13P51153 203 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 CBX1P83916 185 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 CDK5Q00535 292 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 DYNC1I2Q13409 638 aaKnown RBP11.49□□□□□ -0.57
COMMD4-202ENST00000338995 APOFQ13790 326 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 SNAPC1Q16533 368 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 PLA1AQ53H76 456 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 ZNF782Q6ZMW2 699 aaPredicted RBP11.49□□□□□ -0.57
COMMD4-202ENST00000338995 GDPD3Q7L5L3 318 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 PIGWQ7Z7B1 504 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 CAPSLQ8WWF8 208 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 TEAD3Q99594 435 aa11.49□□□□□ -0.57
COMMD4-202ENST00000338995 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.49□□□□□ -0.57
COMMD4-202ENST00000338995 FAM206AQ9NX38 181 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms