RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 HNRNPKP61978 463 aaKnown RBP eCLIP12.46□□□□□ -0.41
PCDH8-201ENST00000338862 RPS16P62249 146 aaKnown RBP12.46□□□□□ -0.41
PCDH8-201ENST00000338862 HYAL1Q12794 435 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 C5orf24Q7Z6I8 188 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 OR10D4PQ8NGN7 298 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 OR6S1Q8NH40 331 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 HIST1H2BAQ96A08 127 aa12.46□□□□□ -0.41
PCDH8-201ENST00000338862 GSTP1P09211 210 aaKnown RBP12.46□□□□□ -0.42
PCDH8-201ENST00000338862 EDN3P14138 238 aa12.46□□□□□ -0.42
PCDH8-201ENST00000338862 CHATP28329 748 aa12.46□□□□□ -0.42
PCDH8-201ENST00000338862 MMP16P51512 607 aa12.46□□□□□ -0.42
PCDH8-201ENST00000338862 C1orf100Q5SVJ3 147 aa12.46□□□□□ -0.42
PCDH8-201ENST00000338862 Q7L0L9 218 aa12.46□□□□□ -0.42
PCDH8-201ENST00000338862 SLC38A9Q8NBW4 561 aa12.46□□□□□ -0.42
PCDH8-201ENST00000338862 HAS2Q92819 552 aa12.46□□□□□ -0.42
PCDH8-201ENST00000338862 MRGPRFQ96AM1 343 aa12.46□□□□□ -0.42
PCDH8-201ENST00000338862 TICRRQ7Z2Z1 1910 aa12.46□□□□□ -0.42
PCDH8-201ENST00000338862 OBSL1O75147 1896 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 A0A1W2PPC4 97 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 ZNF705GA8MUZ8 300 aaPredicted RBP12.45□□□□□ -0.42
PCDH8-201ENST00000338862 HSD17B6O14756 317 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 SULT1A1P50225 295 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 B2MP61769 119 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 POLR2GP62487 172 aaKnown RBP eCLIP12.45□□□□□ -0.42
PCDH8-201ENST00000338862 MRPS34P82930 218 aaKnown RBP12.45□□□□□ -0.42
PCDH8-201ENST00000338862 DEFA6Q01524 100 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 ZNF528Q3MIS6 628 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 AKR1C8PQ5T2L2 129 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 DHRS7BQ6IAN0 325 aaPredicted RBP12.45□□□□□ -0.42
PCDH8-201ENST00000338862 ZNF343Q6P1L6 599 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 LCN15Q6UWW0 184 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 C19orf12Q9NSK7 152 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 FAM206AQ9NX38 181 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 ZNF581Q9P0T4 197 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 DKKL1Q9UK85 242 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 MMACHCQ9Y4U1 282 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 CYB5BO43169 146 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 TMEM127O75204 238 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 HKR1P10072 659 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 OR51H1Q8NH63 302 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 CCNL2Q96S94 520 aaPredicted RBP12.45□□□□□ -0.42
PCDH8-201ENST00000338862 SPTBN2O15020 2390 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 IFNA4P05014 189 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 IGFBP3P17936 291 aaPredicted RBP12.45□□□□□ -0.42
PCDH8-201ENST00000338862 RAB11AP62491 216 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 MRPS21P82921 87 aaKnown RBP12.45□□□□□ -0.42
PCDH8-201ENST00000338862 DOK3Q7L591 496 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 FBXL14Q8N1E6 418 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 SLC25A43Q8WUT9 341 aaPredicted RBP12.45□□□□□ -0.42
PCDH8-201ENST00000338862 RHOVQ96L33 236 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 PECRQ9BY49 303 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 GSN-AS1Q9NRJ2 163 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 CYTL1Q9NRR1 136 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 CLDN16Q9Y5I7 305 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 LHFPL6Q9Y693 200 aa12.45□□□□□ -0.42
PCDH8-201ENST00000338862 A0A1B0GX78 115 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 M0R135 149 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 ST8SIA3O43173 380 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 NDUFA2O43678 99 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 ZNF708P17019 499 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 RAB5AP20339 215 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 NKX6-1P78426 367 aaPredicted RBP12.44□□□□□ -0.42
PCDH8-201ENST00000338862 RUNX1Q01196 453 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 HABP2Q14520 560 aaPredicted RBP12.44□□□□□ -0.42
PCDH8-201ENST00000338862 ZNF799Q96GE5 643 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 ALKBH3Q96Q83 286 aaPredicted RBP12.44□□□□□ -0.42
PCDH8-201ENST00000338862 RTBDNQ9BSG5 229 aaPredicted RBP12.44□□□□□ -0.42
PCDH8-201ENST00000338862 GNG13Q9P2W3 67 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 AK3Q9UIJ7 227 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 MMP17Q9ULZ9 603 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 ROS1P08922 2347 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 HSPB2A8KAH6 182 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 HSPA12AO43301 675 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 HSPB2Q16082 182 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 PIGYQ3MUY2 71 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 PLCXD3Q63HM9 321 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 FAM166AQ6J272 317 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 PHOSPHO2Q8TCD6 241 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 ASB13Q8WXK3 278 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 UCN2Q96RP3 112 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 CRISPLD2Q9H0B8 497 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 ZMAT5Q9UDW3 170 aaKnown RBP12.44□□□□□ -0.42
PCDH8-201ENST00000338862 LIPGQ9Y5X9 500 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 PRR19A6NJB7 356 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 ANOS1P23352 680 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 APOBEC1P41238 236 aaKnown RBP12.44□□□□□ -0.42
PCDH8-201ENST00000338862 THEM4Q5T1C6 240 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 ABHD14AQ9BUJ0 271 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 LRFN1Q9P244 771 aa12.44□□□□□ -0.42
PCDH8-201ENST00000338862 HTR5AP47898 357 aa12.43□□□□□ -0.42
PCDH8-201ENST00000338862 OPN5Q6U736 354 aa12.43□□□□□ -0.42
PCDH8-201ENST00000338862 BEND4Q6ZU67 534 aa12.43□□□□□ -0.42
PCDH8-201ENST00000338862 SYT3Q9BQG1 590 aa12.43□□□□□ -0.42
PCDH8-201ENST00000338862 EDEM2Q9BV94 578 aa12.43□□□□□ -0.42
PCDH8-201ENST00000338862 METTL9Q9H1A3 318 aa12.43□□□□□ -0.42
PCDH8-201ENST00000338862 FSCN3Q9NQT6 498 aa12.43□□□□□ -0.42
PCDH8-201ENST00000338862 MCTS1Q9ULC4 181 aaKnown RBP12.43□□□□□ -0.42
PCDH8-201ENST00000338862 VPS13AQ96RL7 3174 aa12.43□□□□□ -0.42
PCDH8-201ENST00000338862 TSPAN2O60636 221 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms