RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 PTRH2Q9Y3E5 179 aaKnown RBP9.43□□□□□ -0.9
RTN3-201ENST00000338850 POMT1Q9Y6A1 747 aa9.43□□□□□ -0.9
RTN3-201ENST00000338850 CHCHD2Q9Y6H1 151 aaPredicted RBP9.43□□□□□ -0.9
RTN3-201ENST00000338850 UTP20O75691 2785 aaKnown RBP9.43□□□□□ -0.9
RTN3-201ENST00000338850 POM121CA8CG34 1229 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 H3BML4 177 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 MPIG6BO95866 241 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 GAPDHP04406 335 aaKnown RBP9.42□□□□□ -0.9
RTN3-201ENST00000338850 UMODP07911 640 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 CD63P08962 238 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 RPS2P15880 293 aaKnown RBP9.42□□□□□ -0.9
RTN3-201ENST00000338850 GNB3P16520 340 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 SERPINF1P36955 418 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 TMEM50BP56557 158 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 NKPD1Q17RQ9 610 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 PXDC1Q5TGL8 231 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 OTPQ5XKR4 325 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 OR52W1Q6IF63 320 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 C17orf107Q6ZR85 190 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 PPP1R32Q7Z5V6 425 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 BAP18Q8IXM2 172 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 GVQW1Q8N7I0 195 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 WDSUB1Q8N9V3 476 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 OR10G3Q8NGC4 313 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 HAS2Q92819 552 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 CMBLQ96DG6 245 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 GAL3ST1Q99999 423 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 NAA11Q9BSU3 229 aaPredicted RBP9.42□□□□□ -0.9
RTN3-201ENST00000338850 CRB3Q9BUF7 120 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 ANGPTL4Q9BY76 406 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 DEFB126Q9BYW3 111 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 ZMAT3Q9HA38 289 aaKnown RBP9.42□□□□□ -0.9
RTN3-201ENST00000338850 SH2D2AQ9NP31 389 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 C12orf4Q9NQ89 552 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 MMP26Q9NRE1 261 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 TAS2R3Q9NYW6 316 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 ASH2LQ9UBL3 628 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 HRH3Q9Y5N1 445 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 NCOA6Q14686 2063 aaPredicted RBP9.42□□□□□ -0.9
RTN3-201ENST00000338850 UNC79Q9P2D8 2635 aa9.42□□□□□ -0.9
RTN3-201ENST00000338850 SHANK1Q9Y566 2161 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 IGHV3-20A0A0C4DH32 117 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 IGKV1-9A0A0C4DH69 117 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 GJE1A6NN92 205 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 F5H0A9 414 aaPredicted RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 DNASE2O00115 360 aaPredicted RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 ATG12O94817 140 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 IGHEP01854 428 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 CTSDP07339 412 aaPredicted RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 HCKP08631 526 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 QDPRP09417 244 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 VAMP1P23763 118 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 DTYMKP23919 212 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 GUCA1AP43080 201 aaPredicted RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 PTGFRP43088 359 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 OR3A4PP47883 348 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 CSNK1A1P48729 337 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 CSNK2A1P68400 391 aaPredicted RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 MRPS34P82930 218 aaKnown RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 FLI1Q01543 452 aaPredicted RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 BTN1A1Q13410 526 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 ENDOGQ14249 297 aaKnown RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 ZNF169Q14929 603 aaPredicted RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 PCOLCEQ15113 449 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 KRTAP27-1Q3LI81 207 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 PABPC1L2AQ5JQF8 200 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 DCAF10Q5QP82 559 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 AADACL3Q5VUY0 350 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 CRIP3Q6Q6R5 217 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 ASCL4Q6XD76 172 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 SULF2Q8IWU5 870 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 ZNF100Q8IYN0 542 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 SPAG16Q8N0X2 631 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 TMEM123Q8N131 208 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 SVBPQ8N300 66 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 ZNF283Q8N7M2 679 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 POC1AQ8NBT0 407 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 ADAD2Q8NCV1 583 aaKnown RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 TMEM104Q8NE00 496 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 M1APQ8TC57 530 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 MARCH1Q8TCQ1 289 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 NABP1Q96AH0 204 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 TMEM41AQ96HV5 264 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 FER1L6-AS2Q96M78 137 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 TECTBQ96PL2 329 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 OR5B2Q96R09 309 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 NICN1Q9BSH3 213 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 RNF126Q9BV68 326 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 EMC6Q9BV81 110 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 ZNF700Q9H0M5 742 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 CYTL1Q9NRR1 136 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 ZFP57Q9NU63 452 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 P4HTMQ9NXG6 502 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 IL36GQ9NZH8 169 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 NDRG3Q9UGV2 375 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 FOXD3Q9UJU5 478 aaPredicted RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 PURGQ9UJV8 347 aaKnown RBP9.41□□□□□ -0.9
RTN3-201ENST00000338850 PCDHB10Q9UN67 800 aa9.41□□□□□ -0.9
RTN3-201ENST00000338850 CSAG2Q9Y5P2 127 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms