RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PPIL1Q9Y3C6 166 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 QSER1Q2KHR3 1735 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 C5orf52A6NGY3 159 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 COLCA2A8K830 154 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 RRADP55042 308 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 SRPXP78539 464 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 TMEM267Q0VDI3 215 aaPredicted RBP11.79□□□□□ -0.52
COL2A1-201ENST00000337299 FZD2Q14332 565 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 LY6G6FQ5SQ64 297 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 TMEM215Q68D42 235 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 FAHD2BQ6P2I3 314 aaPredicted RBP11.79□□□□□ -0.52
COL2A1-201ENST00000337299 LYZL2Q7Z4W2 148 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 ADAMTS17Q8TE56 1095 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 APOBEC4Q8WW27 367 aaKnown RBP11.79□□□□□ -0.52
COL2A1-201ENST00000337299 EXTL1Q92935 676 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 ANKRD9Q96BM1 317 aaPredicted RBP11.79□□□□□ -0.52
COL2A1-201ENST00000337299 FAHD2AQ96GK7 314 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 TMEM184BQ9Y519 407 aaPredicted RBP11.79□□□□□ -0.52
COL2A1-201ENST00000337299 CACNA1GO43497 2377 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 BCKDHBP21953 392 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 ECI1P42126 302 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 KIR3DL2P43630 455 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 EFNB1P98172 346 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 LPAL2Q16609 132 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 MESTQ5EB52 335 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 C9orf135Q5VTT2 229 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 DPPA3Q6W0C5 159 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 POC1BQ8TC44 478 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 DMRTA2Q96SC8 542 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 TBX15Q96SF7 602 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 TXNIPQ9H3M7 391 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 ANKRD10Q9NXR5 420 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 TINAGQ9UJW2 476 aa11.79□□□□□ -0.52
COL2A1-201ENST00000337299 SPRY1O43609 319 aaPredicted RBP11.78□□□□□ -0.52
COL2A1-201ENST00000337299 CTSVO60911 334 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 LIMK1P53667 647 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 ZNF121P58317 390 aaPredicted RBP11.78□□□□□ -0.52
COL2A1-201ENST00000337299 PHF19Q5T6S3 580 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 ZNF596Q8TC21 504 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 DEFB126Q9BYW3 111 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 KCNE5Q9UJ90 142 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 SERTAD3Q9UJW9 196 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 SLCO1B1Q9Y6L6 691 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 PAPPA2Q9BXP8 1791 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 SIAH2O43255 324 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 TBX6O95947 436 aaPredicted RBP11.78□□□□□ -0.52
COL2A1-201ENST00000337299 VSIG8P0DPA2 414 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 IL9P15248 144 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 HSF1Q00613 529 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 CNN3Q15417 329 aaKnown RBP11.78□□□□□ -0.52
COL2A1-201ENST00000337299 ZNF77Q15935 545 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 ZNF595Q8IYB9 648 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 FAAP24Q9BTP7 215 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 KIR3DX1Q9H7L2 352 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 PLEKHF2Q9H8W4 249 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 LYRM4Q9HD34 91 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 LHX9Q9NQ69 397 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 MYOFQ9NZM1 2061 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 UBE2CO00762 179 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 SNRPCP09234 159 aaKnown RBP11.78□□□□□ -0.52
COL2A1-201ENST00000337299 HLA-DOBP13765 273 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 MMP16P51512 607 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 TGFBR3Q03167 851 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 MGAT2Q10469 447 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 VN1R4Q7Z5H5 301 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 SH3BGRL3Q9H299 93 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 ENY2Q9NPA8 101 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 MED12Q93074 2177 aa11.78□□□□□ -0.52
COL2A1-201ENST00000337299 FAM221BA6H8Z2 402 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 CD8AP01732 235 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 FABP6P51161 128 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 DPTQ07507 201 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 PHYHD1Q5SRE7 291 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 DMRTA1Q5VZB9 504 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 MRGPREQ86SM8 312 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 ZNRF4Q8WWF5 429 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 LINC00615Q96LM1 132 aaPredicted RBP11.77□□□□□ -0.52
COL2A1-201ENST00000337299 ULBP2Q9BZM5 246 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 ZNF576Q9H609 170 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 KIF26BQ2KJY2 2108 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 IGHV3-20A0A0C4DH32 117 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 LMX1BO60663 402 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 TUSC2O75896 110 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 ATP6V0CP27449 155 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 FOXO1Q12778 655 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 TMEM241Q24JQ0 296 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 FAM78BQ5VT40 261 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 ZNF813Q6ZN06 617 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 H1FNTQ75WM6 255 aaPredicted RBP11.77□□□□□ -0.52
COL2A1-201ENST00000337299 CDC20BQ86Y33 519 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 OR10AD1Q8NGE0 317 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 C11orf40Q8WZ69 217 aa11.77□□□□□ -0.52
COL2A1-201ENST00000337299 RPP25Q9BUL9 199 aaKnown RBP11.77□□□□□ -0.52
COL2A1-201ENST00000337299 ESPL1Q14674 2120 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 A0A1W2PNR3 127 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 OPN1MWP04001 364 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 OPN1MW2P0DN77 364 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 OPN1MW3P0DN78 364 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 ADCYAP1P18509 176 aa11.77□□□□□ -0.53
COL2A1-201ENST00000337299 SPCS3P61009 180 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms