RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 LCN15Q6UWW0 184 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR52M1Q8NGK5 317 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR8D4Q8NGM9 314 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 SIPA1L1O43166 1804 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 TICRRQ7Z2Z1 1910 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 HOXA6P31267 233 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 ASIPP42127 132 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 GNG3P63215 75 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 PRDX4Q13162 271 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 SURF2Q15527 256 aaPredicted RBP5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 LHX4Q969G2 390 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC6A18Q96N87 628 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 SELENOIQ9C0D9 397 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 LHX5Q9H2C1 402 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 GPRC5CQ9NQ84 441 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 PKDREJQ9NTG1 2253 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 A0A1W2PRS3 328 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 PTP4A2Q12974 167 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 IL13RA2Q14627 380 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 NCBP2-AS2Q69YL0 99 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 EPGNQ6UW88 154 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZCCHC23Q6ZST2 131 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 MDP1Q86V88 176 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 TMEM116Q8NCL8 245 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR1L1Q8NH94 360 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 NUDT22Q9BRQ3 303 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 FAM234AQ9H0X4 552 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 ST20Q9HBF5 79 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 RBM22Q9NW64 420 aaKnown RBP eCLIP5.48□□□□□ -1.531e-6■■■■□ 19.3
CDC42BPA-201ENST00000334218 FITM1A5D6W6 292 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF253O75346 499 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR9G9P0C7N8 305 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 PCSK6P29122 969 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 CPOXP36551 454 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR1Q1Q15612 314 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 STYXQ8WUJ0 223 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 NUS1Q96E22 293 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 NMES1Q9C002 83 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 CDCP1Q9H5V8 836 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 CLEC2DQ9UHP7 191 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 MTCH2Q9Y6C9 303 aa5.48□□□□□ -1.53
CDC42BPA-201ENST00000334218 H0YGN5 161 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 SULT2B1O00204 365 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 INAFM2P0DMQ5 153 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 ACHEP22303 614 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 SERTAD2Q14140 314 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 MBLAC2Q68D91 279 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 ACSM5Q6NUN0 579 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 FAHD1Q6P587 224 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 C11orf40Q8WZ69 217 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC25A51Q9H1U9 297 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 MS4A6AQ9H2W1 248 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 NDUFB11Q9NX14 153 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 INSL6Q9Y581 213 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 CSAG2Q9Y5P2 127 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 K7N7A8 449 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 NKX2-8O15522 239 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 IL2RAP01589 272 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 AQP1P29972 269 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 HLA-DRB3P79483 266 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 TPBGQ13641 420 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 OCIAD2Q56VL3 154 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC25A2Q9BXI2 301 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF385DQ9H6B1 395 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 SRD5A3Q9H8P0 318 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 MMP25Q9NPA2 562 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 HS3ST3A1Q9Y663 406 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 MAP2P11137 1827 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 MASP2O00187 686 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 TMPRSS11DO60235 418 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 TMEM50AO95807 157 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 HPRT1P00492 218 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 OAS1P00973 400 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 EIF4EP06730 217 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 FUT3P21217 361 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 PARP15Q460N3 678 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 NOTUMQ6P988 496 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF114Q8NC26 417 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 CCDC140Q96MF4 163 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 DCAF13Q9NV06 445 aaKnown RBP5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 DOCK1Q14185 1865 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 LOC105371267A0A1B0GV96 52 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 TIMP2P16035 220 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 SGSHP51688 502 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR9G1Q8NH87 305 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 BMFQ96LC9 184 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 C12orf42Q96LP6 360 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 DUSP23Q9BVJ7 150 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 CORINQ9Y5Q5 1042 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 DHHO43323 396 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 PRSS1P07477 247 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 CHRM2P08172 466 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 MICBQ29980 383 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 MARCH8Q5T0T0 291 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 MS4A3Q96HJ5 214 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 DNAJC30Q96LL9 226 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 CSTL1Q9H114 145 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 FBXL15Q9H469 300 aa5.47□□□□□ -1.53
CDC42BPA-201ENST00000334218 HSFX1Q9UBD0 423 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms