RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SNAPINO95295 136 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 IFNA2P01563 188 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 PATE4P0C8F1 98 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 ACKR3P25106 362 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 RBMXP38159 391 aaKnown RBP10.76□□□□□ -0.69
VPS33B-201ENST00000333371 CSNK1A1P48729 337 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 RAB13P51153 203 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 TAS2R46P59540 309 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 GRB2P62993 217 aaKnown RBP10.76□□□□□ -0.69
VPS33B-201ENST00000333371 ERGIC1Q969X5 290 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 SMIM8Q96KF7 97 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 PIGQQ9BRB3 760 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 SEC11CQ9BY50 192 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 C14orf166Q9Y224 244 aaKnown RBP10.76□□□□□ -0.69
VPS33B-201ENST00000333371 PCDHGA1Q9Y5H4 931 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 CHCHD2Q9Y6H1 151 aaPredicted RBP10.76□□□□□ -0.69
VPS33B-201ENST00000333371 ZNF98A6NK75 572 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 FIGNL2A6NMB9 653 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 DHRS3O75911 302 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 TMEM225BP0DP42 221 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 MSR1P21757 451 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 RPL12P30050 165 aaKnown RBP10.76□□□□□ -0.69
VPS33B-201ENST00000333371 FCGR2CP31995 323 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 CAV2P51636 162 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 EMG1Q92979 244 aaKnown RBP10.76□□□□□ -0.69
VPS33B-201ENST00000333371 CNTNAP3Q9BZ76 1288 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 OCIAD1Q9NX40 245 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 PLEK2Q9NYT0 353 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 C19orf25Q9UFG5 118 aaPredicted RBP10.76□□□□□ -0.69
VPS33B-201ENST00000333371 B3GALT1Q9Y5Z6 326 aa10.76□□□□□ -0.69
VPS33B-201ENST00000333371 FAM230AA0A1W2PPH8 454 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 ZNHIT1O43257 154 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 CD63P08962 238 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 RFC3P40938 356 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 CBX5P45973 191 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 TMEM33P57088 247 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 FXYD4P59646 89 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 TGIF1Q15583 401 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 KCNMB1Q16558 191 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 GGNBP1Q5YKI7 109 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 IL34Q6ZMJ4 242 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 Q6ZRG5 221 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 SULF2Q8IWU5 870 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 NABP1Q96AH0 204 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 FBXO17Q96EF6 278 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 REEP6Q96HR9 211 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 AKR1E2Q96JD6 320 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 SCGB3A2Q96PL1 93 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 KLF2Q9Y5W3 355 aaPredicted RBP10.75□□□□□ -0.69
VPS33B-201ENST00000333371 URB1O60287 2271 aaKnown RBP10.75□□□□□ -0.69
VPS33B-201ENST00000333371 ZDBF2Q9HCK1 2354 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 IGLV3-32A0A0A0MS00 114 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 PATE3B3GLJ2 98 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 K7EPK0 472 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 M0R135 149 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 XRCC2O43543 280 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 DIRAS3O95661 229 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 IGLV3-1P01715 115 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 FHITP49789 147 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 NOVA1P51513 510 aaKnown RBP10.75□□□□□ -0.69
VPS33B-201ENST00000333371 HGFACQ04756 655 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 RAET1LQ5VY80 246 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 ZNF385CQ66K41 422 aaPredicted RBP10.75□□□□□ -0.69
VPS33B-201ENST00000333371 DHRS11Q6UWP2 260 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 FAM71E2Q8N5Q1 922 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 ADPRHL1Q8NDY3 354 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 RHBDD1Q8TEB9 315 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 SECTM1Q8WVN6 248 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 ZNF799Q96GE5 643 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 MARS2Q96GW9 593 aaKnown RBP10.75□□□□□ -0.69
VPS33B-201ENST00000333371 C12orf57Q99622 126 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 CHST5Q9GZS9 411 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 ZFP57Q9NU63 452 aa10.75□□□□□ -0.69
VPS33B-201ENST00000333371 IGKV1-27A0A075B6S5 117 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 MTRF1O75570 445 aaKnown RBP10.74□□□□□ -0.69
VPS33B-201ENST00000333371 DKK1O94907 266 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 CCL3P10147 92 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 GUCA1AP43080 201 aaPredicted RBP10.74□□□□□ -0.69
VPS33B-201ENST00000333371 F2RL1P55085 397 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 MTCP1P56278 107 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 RPUSD3Q6P087 351 aaKnown RBP10.74□□□□□ -0.69
VPS33B-201ENST00000333371 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.74□□□□□ -0.69
VPS33B-201ENST00000333371 GJC3Q8NFK1 279 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 FNDC9Q8TBE3 224 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 SLC22A8Q8TCC7 542 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 HAS2Q92819 552 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 NELFAQ9H3P2 528 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 NXT1Q9UKK6 140 aaKnown RBP10.74□□□□□ -0.69
VPS33B-201ENST00000333371 AMDHD2Q9Y303 409 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 V9GYS6 101 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 A0A1B0GV50 99 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 C1QL1O75973 258 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 FCGR3AP08637 254 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 CPT2P23786 658 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 THBS4P35443 961 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 SLC35A1P78382 337 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 PHLDA2Q53GA4 152 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 TMEM268Q5VZI3 342 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 C5orf24Q7Z6I8 188 aa10.74□□□□□ -0.69
VPS33B-201ENST00000333371 FADS6Q8N9I5 356 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms