RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 ADAT3Q96EY9 351 aaPredicted RBP11.67□□□□□ -0.54
LIMS1-201ENST00000332345 BORCS8Q96FH0 119 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 MED30Q96HR3 178 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 MRI1Q9BV20 369 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 WDR13Q9H1Z4 485 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 NEK6Q9HC98 313 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 SCN3BQ9NY72 215 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 INSIG2Q9Y5U4 225 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 AUP1Q9Y679 476 aa11.67□□□□□ -0.54
LIMS1-201ENST00000332345 KIR2DS1A0A191URI9 304 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.66□□□□□ -0.54
LIMS1-201ENST00000332345 NOS1APO75052 506 aaPredicted RBP11.66□□□□□ -0.54
LIMS1-201ENST00000332345 ATP6V1G2O95670 118 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 ECDO95905 644 aaPredicted RBP11.66□□□□□ -0.54
LIMS1-201ENST00000332345 LIPFP07098 398 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 ACAA1P09110 424 aaPredicted RBP11.66□□□□□ -0.54
LIMS1-201ENST00000332345 ATF1P18846 271 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 PRKACBP22694 351 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 RBP2P50120 134 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 GTF2A1P52655 376 aaPredicted RBP11.66□□□□□ -0.54
LIMS1-201ENST00000332345 ATP1B3P54709 279 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 PAX8Q06710 450 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 IL24Q13007 206 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 C6orf141Q5SZD1 244 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 OR2G6Q5TZ20 316 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 LAIR2Q6ISS4 152 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 ANGPTL5Q86XS5 388 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 SERPINA12Q8IW75 414 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 POC1AQ8NBT0 407 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 DNAAF1Q8NEP3 725 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 OR5T2Q8NGG2 359 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 OR51A4Q8NGJ6 313 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 OR52N1Q8NH53 320 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 NPRL2Q8WTW4 380 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 GATAD2BQ8WXI9 593 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 SEH1LQ96EE3 360 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 CCL13Q99616 98 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 PDCD1LG2Q9BQ51 273 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 PKIBQ9C010 78 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 RASSF4Q9H2L5 321 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 SNTG1Q9NSN8 517 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 NLKQ9UBE8 527 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 CTSZQ9UBR2 303 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 CLEC2DQ9UHP7 191 aa11.66□□□□□ -0.54
LIMS1-201ENST00000332345 IGHV2-70DA0A0C4DH43 119 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 NKX6-3A6NJ46 265 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 OR2AT4A6NND4 320 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 PTGES3LE9PB15 166 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 DVL1O14640 695 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 GPR37O15354 613 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 OGG1O15527 345 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 NDUFB3O43676 98 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 AVPP01185 164 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 PGA5P0DJD9 388 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 MPZP25189 248 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 MTCP1P56278 107 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 PAX2Q02962 417 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 SMIM21Q3B7S5 101 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 LRRC10Q5BKY1 277 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 STUMQ69YW2 141 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 C1orf229Q6ZS94 237 aaPredicted RBP11.65□□□□□ -0.54
LIMS1-201ENST00000332345 AHSA2Q719I0 299 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 OR10AC1Q8NH08 325 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 ANGPTL6Q8NI99 470 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 MYDGFQ969H8 173 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 SPSB1Q96BD6 273 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 NUDT16L1Q9BRJ7 211 aaKnown RBP11.65□□□□□ -0.54
LIMS1-201ENST00000332345 ZCCHC4Q9H5U6 513 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 OPN4Q9UHM6 478 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 DHDHQ9UQ10 334 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 ERGIC3Q9Y282 383 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 CUBNO60494 3623 aa11.65□□□□□ -0.54
LIMS1-201ENST00000332345 SYNGR1O43759 233 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 ENSAO43768 121 aaKnown RBP11.64□□□□□ -0.55
LIMS1-201ENST00000332345 NXPH2O95156 264 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 CYB5AP00167 134 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 MT-ND2P03891 347 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 PSG2P11465 335 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 MYF6P23409 242 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 GABRA2P47869 451 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 IL13RA1P78552 427 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 CDK5R1Q15078 307 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 IZUMO2Q6UXV1 221 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 ACP7Q6ZNF0 438 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 ZNF788Q6ZQV5 615 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 LHFPL2Q6ZUX7 228 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 BTN2A1Q7KYR7 527 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 C1QL2Q7Z5L3 287 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 CALHM1Q8IU99 346 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 MKXQ8IYA7 352 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 PARP16Q8N5Y8 322 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 PNLDC1Q8NA58 520 aaKnown RBP11.64□□□□□ -0.55
LIMS1-201ENST00000332345 GPR148Q8TDV2 347 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 TSEN15Q8WW01 171 aaKnown RBP11.64□□□□□ -0.55
LIMS1-201ENST00000332345 ST8SIA4Q92187 359 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 ANKRD60Q9BZ19 345 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 TPRKBQ9Y3C4 175 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 MXRA5Q9NR99 2828 aa11.64□□□□□ -0.55
LIMS1-201ENST00000332345 IGKV1-9A0A0C4DH69 117 aa11.63□□□□□ -0.55
LIMS1-201ENST00000332345 MYL12BO14950 172 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms