RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 GATA6Q92908 595 aa9.47□□□□□ -0.89
CLN8-201ENST00000331222 DUSP22Q9NRW4 184 aa9.47□□□□□ -0.89
CLN8-201ENST00000331222 RTTNQ86VV8 2226 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 DDX60LQ5H9U9 1706 aaKnown RBP9.46□□□□□ -0.89
CLN8-201ENST00000331222 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.46□□□□□ -0.89
CLN8-201ENST00000331222 ICMTO60725 284 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 SLC17A1Q14916 467 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 KCNK15Q9H427 330 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 NDUFB11Q9NX14 153 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 ZNF586Q9NXT0 402 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 ZMIZ1Q9ULJ6 1067 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 TRBV23-1A0A0A0MS06 115 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 FRG2CA6NGY1 282 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 KIAA1324LA8MWY0 1029 aaPredicted RBP9.46□□□□□ -0.89
CLN8-201ENST00000331222 COX5AP20674 150 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 DHRS11Q6UWP2 260 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 ZNF793Q6ZN11 406 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 FUNDC1Q8IVP5 155 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 ANKRD34CP0C6C1 535 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 GALNSP34059 522 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 SULT1A1P50225 295 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 SLC37A1P57057 533 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 TMEM108Q6UXF1 575 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 ANKRD53Q8N9V6 530 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 OR4C5Q8NGB2 326 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 OR4D10Q8NGI6 311 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 LRRC29Q8WV35 223 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 PARD6AQ9NPB6 346 aa9.46□□□□□ -0.89
CLN8-201ENST00000331222 ARG1P05089 322 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 PPICP45877 212 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 FCRL6Q6DN72 434 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 SLC38A6Q8IZM9 456 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 MRGPRX4Q96LA9 322 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 TMUB1Q9BVT8 246 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 RTN4RQ9BZR6 473 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 E5RGE8 158 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 TNFRSF10CO14798 259 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 SMAD7O15105 426 aaKnown RBP9.46□□□□□ -0.9
CLN8-201ENST00000331222 JTBO76095 146 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 MT-CO3P00414 261 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 TNFRSF1AP19438 455 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 RAB5AP20339 215 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 PSMB6P28072 239 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 KLF3P57682 345 aaPredicted RBP9.46□□□□□ -0.9
CLN8-201ENST00000331222 ETFDHQ16134 617 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 ETV3LQ6ZN32 361 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 EXTL1Q92935 676 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 PRDM7Q9NQW5 492 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 SERGEFQ9UGK8 458 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 NSG2Q9Y328 171 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 APC2O95996 2303 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 SBK3P0C264 359 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 HOXA4Q00056 320 aaPredicted RBP9.46□□□□□ -0.9
CLN8-201ENST00000331222 OR10D3Q8NH80 312 aa9.46□□□□□ -0.9
CLN8-201ENST00000331222 FUT6P51993 359 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 PRRX1P54821 245 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 C21orf58P58505 322 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 EMC4Q5J8M3 183 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 PRSS3P2Q8NHM4 247 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 IL22RA2Q969J5 263 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 SPACA9Q96E40 222 aaPredicted RBP9.45□□□□□ -0.9
CLN8-201ENST00000331222 RASL11BQ9BPW5 248 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 ZNF385DQ9H6B1 395 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 OR2A25A4D2G3 310 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 TUBAL3A6NHL2 446 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 CEACAM5P06731 702 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 ATF1P18846 271 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 ARRB2P32121 409 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 REG1BP48304 166 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 ETFRF1Q6IPR1 90 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 FDX2Q6P4F2 183 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 PPP1R1CQ8WVI7 109 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 IGKV3OR2-268A0A0C4DH90 116 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 GALR1P47211 349 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 OR2A2Q6IF42 318 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 ZNF841Q6ZN19 808 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 C6orf201Q7Z4U5 140 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 MYPOPQ86VE0 399 aaPredicted RBP9.45□□□□□ -0.9
CLN8-201ENST00000331222 SCARB1Q8WTV0 552 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 HNRNPA3P51991 378 aaKnown RBP9.45□□□□□ -0.9
CLN8-201ENST00000331222 BHLHA15Q7RTS1 189 aaPredicted RBP9.45□□□□□ -0.9
CLN8-201ENST00000331222 TMEM37Q8WXS4 190 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 CMC2Q9NRP2 79 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 U3KQ87 197 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 DIDO1Q9BTC0 2240 aaKnown RBP9.45□□□□□ -0.9
CLN8-201ENST00000331222 A0A1B0GTH9 108 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 SPAARA0A1B0GVQ0 90 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 CALHM3Q86XJ0 350 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 ARHGAP5-AS1Q96IT6 56 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 GABRG3Q99928 467 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 MOB1AQ9H8S9 216 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 PLCH1Q4KWH8 1693 aa9.45□□□□□ -0.9
CLN8-201ENST00000331222 H7C2G1 150 aa9.44□□□□□ -0.9
CLN8-201ENST00000331222 NSUN5P2Q63ZY6 315 aa9.44□□□□□ -0.9
CLN8-201ENST00000331222 FAM219AQ8IW50 185 aa9.44□□□□□ -0.9
CLN8-201ENST00000331222 GPX8Q8TED1 209 aa9.44□□□□□ -0.9
CLN8-201ENST00000331222 EDARADDQ8WWZ3 215 aa9.44□□□□□ -0.9
CLN8-201ENST00000331222 VN1R1Q9GZP7 353 aa9.44□□□□□ -0.9
CLN8-201ENST00000331222 MAST2Q6P0Q8 1798 aa9.44□□□□□ -0.9
CLN8-201ENST00000331222 A0A087WUJ7 227 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms