RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CFPP27918 469 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 HAAOP46952 286 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 OR12D2P58182 307 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 CRIP3Q6Q6R5 217 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 KIR3DL3Q8N743 410 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 ZNRF1Q8ND25 227 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 OR2G2Q8NGZ5 317 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 OR10AC1Q8NH08 325 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 PELI1Q96FA3 418 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 ELL3Q9HB65 397 aaPredicted RBP12□□□□□ -0.49
PPP1CA-201ENST00000312989 FAM118AQ9NWS6 357 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 DNAJB11Q9UBS4 358 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 MYRFQ9Y2G1 1151 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 GMPPBQ9Y5P6 360 aa12□□□□□ -0.49
PPP1CA-201ENST00000312989 IGHV1-69DA0A0B4J2H0 117 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 GPR37O15354 613 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 SYT7O43581 403 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 NDUFB3O43676 98 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 WBP4O75554 376 aaKnown RBP11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 IGHV1-69P01742 117 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 HKR1P10072 659 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 CEBPDP49716 269 aaPredicted RBP11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 CAV3P56539 151 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 BPIFB3P59826 476 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 IL13RA1P78552 427 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 PRB3Q04118 309 aaPredicted RBP11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 BAMBIQ13145 260 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 AWAT1Q58HT5 328 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 METAP1DQ6UB28 335 aaPredicted RBP11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 VMO1Q7Z5L0 202 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 ANGPTL5Q86XS5 388 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 ZNF573Q86YE8 665 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 ADAT3Q96EY9 351 aaPredicted RBP11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 MRPS18AQ9NVS2 196 aaKnown RBP11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 SLC25A10Q9UBX3 287 aaPredicted RBP11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 GNG8Q9UK08 70 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 ORC6Q9Y5N6 252 aa11.99□□□□□ -0.49
PPP1CA-201ENST00000312989 LOC100130705A0A1B0GUX0 176 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 A0A1B0GVI7 797 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 OR4C45A6NMZ5 311 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 RNASEK-C17orf49H0YIS7 233 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 ISG15P05161 165 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 ACTG1P63261 375 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 ACTC1P68032 377 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 ACTA1P68133 377 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 PDCD1Q15116 288 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 LRRC10Q5BKY1 277 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 GPR157Q5UAW9 335 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 METTL11BQ5VVY1 283 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 HCP5Q6MZN7 132 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 Q6YL49 198 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 ZBTB49Q6ZSB9 765 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 RNF144BQ7Z419 303 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 BATF2Q8N1L9 274 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 C11orf42Q8N5U0 333 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 ACBD7Q8N6N7 88 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 OR51A4Q8NGJ6 313 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 ZNF671Q8TAW3 534 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 LHX4Q969G2 390 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 TMIGD2Q96BF3 282 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 PKIBQ9C010 78 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 ISG20L2Q9H9L3 353 aaKnown RBP11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 UNKLQ9H9P5 680 aaKnown RBP11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 ZMAT3Q9HA38 289 aaKnown RBP11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 AMBNQ9NP70 447 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 RASL12Q9NYN1 266 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 MTCH1Q9NZJ7 389 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 CMYA5Q8N3K9 4069 aa11.98□□□□□ -0.49
PPP1CA-201ENST00000312989 A0A0U1RQK1 487 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 NKX6-3A6NJ46 265 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 RFPL4AA6NLU0 287 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 E9PI62 339 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 RFPL4AL1F8VTS6 287 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 HOXA3O43365 443 aaPredicted RBP11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 MELTFP08582 738 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 UBCP0CG48 685 aaKnown RBP11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 ATP6V1E1P36543 226 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 CCR9P51686 369 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 IL24Q13007 206 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 SMN1Q16637 294 aaKnown RBP11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 CCDC54Q8NEL0 328 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 TRMT10AQ8TBZ6 339 aaKnown RBP11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 C10orf35Q96D05 121 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 MED30Q96HR3 178 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 C4orf36Q96KX1 117 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 SIRT7Q9NRC8 400 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 C19orf12Q9NSK7 152 aa11.97□□□□□ -0.49
PPP1CA-201ENST00000312989 DAPL1A0PJW8 107 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 ZNF737O75373 536 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 GABRA2P47869 451 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 GALEQ14376 348 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 ZSCAN26Q16670 478 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 ASPHD2Q6ICH7 369 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 C12orf54Q6X4T0 127 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 RBMS3Q6XE24 437 aaKnown RBP11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 KCTD20Q7Z5Y7 419 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 C10orf67Q8IYJ2 551 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 SYS1Q8N2H4 156 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 OR52I1Q8NGK6 324 aa11.96□□□□□ -0.49
PPP1CA-201ENST00000312989 NPRL2Q8WTW4 380 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms