RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 GABRB1P18505 474 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 CFPP27918 469 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 CEBPDP49716 269 aaPredicted RBP13.43□□□□□ -0.26
LSM1-201ENST00000311351 COMPP49747 757 aaPredicted RBP13.43□□□□□ -0.26
LSM1-201ENST00000311351 ACTC1P68032 377 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 ACTA1P68133 377 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 ZNF91Q05481 1191 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 GABPB1Q06547 395 aaPredicted RBP13.43□□□□□ -0.26
LSM1-201ENST00000311351 CDONQ4KMG0 1287 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 SLC25A30Q5SVS4 291 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 ACP7Q6ZNF0 438 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 CALHM1Q8IU99 346 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 ENTHD1Q8IYW4 607 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 RDH10Q8IZV5 341 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 ZNRF1Q8ND25 227 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 TMEM185AQ8NFB2 350 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 GATAD2BQ8WXI9 593 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 ZMAT3Q9HA38 289 aaKnown RBP13.43□□□□□ -0.26
LSM1-201ENST00000311351 SIRT7Q9NRC8 400 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 MAB21L2Q9Y586 359 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 KPTNQ9Y664 436 aa13.43□□□□□ -0.26
LSM1-201ENST00000311351 IGHV1-69DA0A0B4J2H0 117 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 FAM230AA0A1W2PPH8 454 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 DAPL1A0PJW8 107 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 HOXA3O43365 443 aaPredicted RBP13.42□□□□□ -0.26
LSM1-201ENST00000311351 IGHV1-69P01742 117 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 PDCD1Q15116 288 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 SMIM21Q3B7S5 101 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 AWAT1Q58HT5 328 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 MEDAGQ5VYS4 303 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 ZBTB49Q6ZSB9 765 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 ANGPTL5Q86XS5 388 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 ZNF573Q86YE8 665 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 C8orf46Q8TAG6 207 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 ZDHHC16Q969W1 377 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 LGALS12Q96DT0 336 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 MED30Q96HR3 178 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 TNFRSF19Q9NS68 423 aa13.42□□□□□ -0.26
LSM1-201ENST00000311351 NBEAL1Q6ZS30 2694 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 IGKV1-27A0A075B6S5 117 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 CLDN34H7C241 214 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 GPR37O15354 613 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 SLC16A6O15403 523 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 BAG2O95816 211 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 UBCP0CG48 685 aaKnown RBP13.41□□□□□ -0.26
LSM1-201ENST00000311351 HKR1P10072 659 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 DBTP11182 482 aaKnown RBP13.41□□□□□ -0.26
LSM1-201ENST00000311351 MPZP25189 248 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 CAV3P56539 151 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 OR12D2P58182 307 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 NANOS3P60323 173 aaKnown RBP13.41□□□□□ -0.26
LSM1-201ENST00000311351 KLRD1Q13241 179 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 UBE2V2Q15819 145 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 CD177Q8N6Q3 437 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 KIR3DL3Q8N743 410 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 Q8N7P7 452 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 OR2G2Q8NGZ5 317 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 SLC25A28Q96A46 364 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 NRIP2Q9BQI9 281 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 ADI1Q9BV57 179 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 CHST5Q9GZS9 411 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 POLDIP2Q9Y2S7 368 aa13.41□□□□□ -0.26
LSM1-201ENST00000311351 A0A1W2PQ09 198 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 RFPL4AA6NLU0 287 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 RFPL4AL1F8VTS6 287 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 NXPH2O95156 264 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 CAPZA1P52907 286 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 BPIFB3P59826 476 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 ZSCAN26Q16670 478 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 CMTM4Q8IZR5 234 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 ACBD7Q8N6N7 88 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 C3orf56Q8N813 242 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 OR10AC1Q8NH08 325 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 ADAT3Q96EY9 351 aaPredicted RBP13.4□□□□□ -0.26
LSM1-201ENST00000311351 SDSLQ96GA7 329 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 C4orf36Q96KX1 117 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 PRDM13Q9H4Q3 707 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 AMBNQ9NP70 447 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 RASL12Q9NYN1 266 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 FRRS1LQ9P0K9 344 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 EXOGQ9Y2C4 368 aaKnown RBP13.4□□□□□ -0.26
LSM1-201ENST00000311351 MYRFQ9Y2G1 1151 aa13.4□□□□□ -0.26
LSM1-201ENST00000311351 A0A0U1RQK1 487 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 LOC100130705A0A1B0GUX0 176 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 A0A1W2PRD5 423 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 A0A1W2PRF3 423 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 A0A1W2PRM7 423 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 RNASEK-C17orf49H0YIS7 233 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 J3QLW9 94 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 NOS1APO75052 506 aaPredicted RBP13.39□□□□□ -0.27
LSM1-201ENST00000311351 MELTFP08582 738 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 ZNF19P17023 458 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 Q6YL49 198 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 FAM185AQ8N0U4 392 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 PNKDQ8N490 385 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 RHOXF1Q8NHV9 184 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 APH1BQ8WW43 257 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 PELI1Q96FA3 418 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 HES4Q9HCC6 221 aa13.39□□□□□ -0.27
LSM1-201ENST00000311351 FAM118AQ9NWS6 357 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms