RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 GLULP15104 373 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 REC114Q7Z4M0 266 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 STXBP6Q8NFX7 210 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 OIT3Q8WWZ8 545 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 ATOH1Q92858 354 aaPredicted RBP13.93□□□□□ -0.18
HCFC1-201ENST00000310441 MIEN1Q9BRT3 115 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 SLC25A1P53007 311 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 SLC38A11Q08AI6 406 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 DOK1Q99704 481 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 HMSDA8MTL9 139 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 Q3ZCU0 254 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 YRDCQ86U90 279 aaKnown RBP13.93□□□□□ -0.18
HCFC1-201ENST00000310441 HINT3Q9NQE9 182 aaKnown RBP13.93□□□□□ -0.18
HCFC1-201ENST00000310441 RASL12Q9NYN1 266 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 NPY1RP25929 384 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 LGALS7P47929 136 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 CRYGNQ8WXF5 182 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 CTRCQ99895 268 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 TMEM204Q9BSN7 226 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 DUSP21Q9H596 190 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 MRPS16Q9Y3D3 137 aaKnown RBP13.93□□□□□ -0.18
HCFC1-201ENST00000310441 FAM74A7A6NL05 159 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 FABP5Q01469 135 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 C17orf99Q6UX52 265 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 TSPAN12O95859 305 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 CD226Q15762 336 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 TMEM116Q8NCL8 245 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 MISP3Q96FF7 219 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 CLEC1BQ9P126 229 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 CXorf51AA0A1B0GTR3 108 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 CLEC2LP0C7M8 214 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 RELBQ01201 579 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 KHDC3LQ587J8 217 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 ANKRD10Q9NXR5 420 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 TGFBR1P36897 503 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 HLA-BQ31612 363 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 ERASQ7Z444 233 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 RPEQ96AT9 228 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 ANGPTL4Q9BY76 406 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 DHRS3O75911 302 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 SLC2A10O95528 541 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 GSG1Q2KHT4 349 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 SSX8Q7RTT4 187 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 Q9N2K0 584 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 SLCO1C1Q9NYB5 712 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 OR6C3Q9NZP0 311 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 UFC1Q9Y3C8 167 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 CSF2RBP32927 897 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 VWA2Q5GFL6 755 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 DPPA3Q6W0C5 159 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 K7ERU9 68 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 RBM45Q8IUH3 476 aaKnown RBP13.92□□□□□ -0.18
HCFC1-201ENST00000310441 SIRT6Q8N6T7 355 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 MAGT1Q9H0U3 335 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 RD3LP0DJH9 198 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 SLC6A1P30531 599 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 WDR31Q8NA23 367 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 ROBO4Q8WZ75 1007 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 NUDT16L1Q9BRJ7 211 aaKnown RBP13.92□□□□□ -0.18
HCFC1-201ENST00000310441 SYT11Q9BT88 431 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 SIRT7Q9NRC8 400 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 OR5V1Q9UGF6 321 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 NAT8Q9UHE5 227 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 A4GNTQ9UNA3 340 aa13.92□□□□□ -0.18
HCFC1-201ENST00000310441 GTF3C1Q12789 2109 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 SRSF9Q13242 221 aaKnown RBP eCLIP13.91□□□□□ -0.18
HCFC1-201ENST00000310441 ASCL5Q7RTU5 278 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 GFYI3L273 518 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 IGHV3-9P01782 118 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 DLX1P56177 255 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 SPRED3Q2MJR0 410 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 OR10D4PQ8NGN7 298 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 WASHC3Q9Y3C0 194 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 AP4M1O00189 453 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 TMEM99Q8N816 258 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 OR5C1Q8NGR4 320 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 NUDCD2Q8WVJ2 157 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 NQO2P16083 231 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 POLR2IP36954 125 aaKnown RBP13.91□□□□□ -0.18
HCFC1-201ENST00000310441 INSM1Q01101 510 aaPredicted RBP13.91□□□□□ -0.18
HCFC1-201ENST00000310441 ACSM5Q6NUN0 579 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 MAVSQ7Z434 540 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 SFTPA2Q8IWL1 248 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 SFTPA1Q8IWL2 248 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 SPACA9Q96E40 222 aaPredicted RBP13.91□□□□□ -0.18
HCFC1-201ENST00000310441 MAP1LC3B2A6NCE7 125 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 PRKRAO75569 313 aaKnown RBP13.91□□□□□ -0.18
HCFC1-201ENST00000310441 FAM157BP0CG42 384 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 GZMKP49863 264 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 OR4A4PQ8NGN8 299 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 OR4S2Q8NH73 311 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 MAP1LC3BQ9GZQ8 125 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 TNRC6CQ9HCJ0 1690 aaKnown RBP13.91□□□□□ -0.18
HCFC1-201ENST00000310441 Q7L0L9 218 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 CHRNA10Q9GZZ6 450 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 CYSLTR2Q9NS75 346 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 GPX5O75715 221 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 BCDIN3DQ7Z5W3 292 aaKnown RBP13.91□□□□□ -0.18
HCFC1-201ENST00000310441 OR13G1Q8NGZ3 307 aa13.91□□□□□ -0.18
HCFC1-201ENST00000310441 PRRX2Q99811 253 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms