RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 FRG2CA6NGY1 282 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 A6NIZ1 184 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 KIR3DP1A8MWS1 328 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 H0YIG0 161 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 XKRYO14609 159 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 GOSR2O14653 212 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TO15178 435 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 BCL2L11O43521 198 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 OR2T1O43869 369 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 NME2P1O60361 137 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 NPIPB7O75200 414 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 RPP14O95059 124 aaKnown RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 AKR7A3O95154 331 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 UTS2O95399 124 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 LY86O95711 162 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 CYB5AP00167 134 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 CLPSP04118 112 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 HRGP04196 525 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 MAS1P04201 325 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 CD3DP04234 171 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ISG15P05161 165 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF735P0CB33 412 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 CD99P14209 185 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 HPGDP15428 266 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ABOP16442 354 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 KLK2P20151 261 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 HTR2CP28335 458 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TACR3P29371 465 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 CRABP1P29762 137 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 SOX2P48431 317 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 RIDAP52758 137 aaKnown RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 CLDN12P56749 244 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 SLC26A5P58743 744 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TAS2R31P59538 309 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 RAP1BP61224 184 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 RPL27P61353 136 aaKnown RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 RAP1AP62834 184 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 BTG2P78543 158 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 CYCSP99999 105 aaKnown RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 NAAAQ02083 359 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 EGR4Q05215 589 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 RBPJQ06330 500 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ZP4Q12836 540 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 SNTB1Q13884 538 aaKnown RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 FAM189A2Q15884 450 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 PCK2Q16822 640 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 C4orf46Q504U0 113 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 MESTQ5EB52 335 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 WDR38Q5JTN6 314 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 LY6G6FQ5SQ64 297 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM244Q5VVB8 128 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 NSUN5P2Q63ZY6 315 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM225Q6GV28 225 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 OR7E24Q6IFN5 339 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 C11orf88Q6PI97 169 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 PAPD4Q6PIY7 484 aaKnown RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 DNM1P34Q6PK57 102 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ALKAL2Q6UX46 152 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 NHLRC1Q6VVB1 395 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF704Q6ZNC4 412 aaPredicted RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ACOT7LQ6ZUV0 252 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 PGAP1Q75T13 922 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 DPY19L4Q7Z388 723 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF546Q86UE3 836 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 SLC25A42Q86VD7 318 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 CATSPERDQ86XM0 798 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TGIF2LYQ8IUE0 185 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 PRSS35Q8N3Z0 413 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 C10orf53Q8N6V4 93 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 PLPP5Q8NEB5 264 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 NFAM1Q8NET5 270 aaPredicted RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 OR4N2Q8NGD1 307 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 OR51D1Q8NGF3 324 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 OR1J4Q8NGS1 313 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 OR10Z1Q8NGY1 313 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 OR6N2Q8NGY6 317 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 COQ8AQ8NI60 647 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 STOML3Q8TAV4 291 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ZNF519Q8TB69 540 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 FAM57AQ8TBR7 257 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 M1APQ8TC57 530 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ELP5Q8TE02 316 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TSEN15Q8WW01 171 aaKnown RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 MRPS24Q96EL2 167 aaKnown RBP4.26□□□□□ -1.73
CKS1B-201ENST00000308987 CXorf58Q96LI9 332 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 MOGAT1Q96PD6 335 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TSPAN32Q96QS1 320 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 SMR3AQ99954 134 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ARPC5LQ9BPX5 153 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 SOX7Q9BT81 388 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TTTY10Q9BZA0 68 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TXNIPQ9H3M7 391 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 EXO5Q9H790 373 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 ELOVL3Q9HB03 270 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 TMEM138Q9NPI0 162 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 IFT46Q9NQC8 304 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 DEPPQ9NTK1 212 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 COMMD9Q9P000 198 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 SHPKQ9UHJ6 478 aa4.26□□□□□ -1.73
CKS1B-201ENST00000308987 RAB22AQ9UL26 194 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms