RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 KLF9Q13886 244 aaPredicted RBP10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZBTB37Q5TC79 503 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 SPICQ8N5J4 248 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 HAS2Q92819 552 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 GPR35Q9HC97 309 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 TMEM38BQ9NVV0 291 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 SDHAF2Q9NX18 166 aa10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 TCF20Q9UGU0 1960 aaKnown RBP10.08□□□□□ -0.8
PCDHGC3-201ENST00000308177 MS4A18H0YCH9 400 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 PDCD6O75340 191 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 LYZL6O75951 148 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 CHATP28329 748 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 EFNB2P52799 333 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 RPS4XP62701 263 aaKnown RBP10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 MS4A18Q3C1V0 323 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 RGS7BPQ6MZT1 257 aaPredicted RBP10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 WFDC8Q8IUA0 241 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 KCNRGQ8N5I3 272 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 APCDD1LQ8NCL9 501 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 H1FXQ92522 213 aaKnown RBP10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 SOCS1O15524 211 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 RECKO95980 971 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 HNF4GQ14541 408 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 SLC23A3Q6PIS1 610 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 TEX261Q6UWH6 196 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 RELL2Q8NC24 303 aaPredicted RBP10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 C10orf35Q96D05 121 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 PRELID1Q9Y255 219 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 U3KQ87 197 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 DFFBO76075 338 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 SNRNP70P08621 437 aaKnown RBP10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 NDUFB7P17568 137 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 GSK3AP49840 483 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 BAP18Q8IXM2 172 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZNF808Q8N4W9 903 aaPredicted RBP10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR1S2Q8NGQ3 325 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 ADAT1Q9BUB4 502 aaKnown RBP10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 PIGMQ9H3S5 423 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 MRPL22Q9NWU5 206 aaKnown RBP10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 GFOD1Q9NXC2 390 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 TRBV5-5A0A0J9YX44 114 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 E5RGE8 158 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 HBE1P02100 147 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 VSIG8P0DPA2 414 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 TLE4Q04727 773 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 PCOLCEQ15113 449 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 BRICD5Q6PL45 260 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 FAM185AQ8N0U4 392 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 PLEKHA2Q9HB19 425 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 HEYLQ9NQ87 328 aaPredicted RBP10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 NSG2Q9Y328 171 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 ATP23Q9Y6H3 246 aa10.07□□□□□ -0.8
PCDHGC3-201ENST00000308177 C1orf196B1AJZ1 125 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 AGFG1P52594 562 aaKnown RBP10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 SMIM21Q3B7S5 101 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 C11orf87Q6NUJ2 197 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 Q8IYB0 196 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR5AP2Q8NGF4 316 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 MRPS24Q96EL2 167 aaKnown RBP10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 SUCNR1Q9BXA5 334 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR2H1Q9GZK4 316 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 PNPP00491 289 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 PLA1AQ53H76 456 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 CYB5R1Q9UHQ9 305 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 SP6Q3SY56 376 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 FAM27BQ5VT28 67 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 H2BFWTQ7Z2G1 175 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 SLC38A6Q8IZM9 456 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 FAM58AQ8N1B3 248 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZNF519Q8TB69 540 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 ST8SIA2Q92186 375 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZNF426Q9BUY5 554 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 DDA1Q9BW61 102 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 SLC25A32Q9H2D1 315 aa10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 RYDENQ9NUL5 291 aaKnown RBP10.06□□□□□ -0.8
PCDHGC3-201ENST00000308177 HPXP02790 462 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 SP1P08047 785 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 PGA4P0DJD7 388 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 PGA3P0DJD8 388 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 COX6A1P12074 109 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 FAM122BQ7Z309 247 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 PARP12Q9H0J9 701 aaKnown RBP10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 C9orf170A2RU37 121 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 SP9P0CG40 484 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 CXCL3P19876 107 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 PTAFRP25105 342 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 CD82P27701 267 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 NHLRC1Q6VVB1 395 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 MSI2Q96DH6 328 aaKnown RBP10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 GPR31O00270 319 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 PIN1P1O15428 100 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 CPN1P15169 458 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 M6PRP20645 277 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 HOXA1P49639 335 aaPredicted RBP10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 MPPED2Q15777 294 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR2B11Q5JQS5 317 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR2G3Q8NGZ4 309 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 BOD1Q96IK1 185 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 PECRQ9BY49 303 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 CHST5Q9GZS9 411 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms