RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TIAF1O95411 115 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 HOXD11P31277 338 aaPredicted RBP9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 RAB7AP51149 207 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 FABP5Q01469 135 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 OR8U1Q8NH10 309 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 OR5B21A6NL26 309 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 APOC3P02656 99 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 OR4A8P0C604 315 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 UBE2G2P60604 165 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 LY6DQ14210 128 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 ZNF266Q14584 549 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 CREB3L2Q70SY1 520 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 WDR31Q8NA23 367 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 C20orf24Q9BUV8 137 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 OR2H1Q9GZK4 316 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 IFITM5A6NNB3 132 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 TGM1P22735 817 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 PPT1P50897 306 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 ISL1P61371 349 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 FAHD1Q6P587 224 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 ARPC5LQ9BPX5 153 aa9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 FAM212BQ9NTI7 297 aaPredicted RBP9.46□□□□□ -0.89
SYNPO2-201ENST00000307142 RFX2P48378 723 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 AARDQ4LEZ3 155 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 ZNF529Q6P280 563 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 RNF165Q6ZSG1 346 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 DDOQ99489 341 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 RSRP1Q9BUV0 290 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 PI4KAP42356 2102 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 RP1P56715 2156 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 IGKV1-8A0A0C4DH67 115 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 SSTR2P30874 369 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 HTR2BP41595 481 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 IGFBP7Q16270 282 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 COMMD7Q86VX2 200 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 SLC38A6Q8IZM9 456 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 NDFIP1Q9BT67 221 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 MPC1Q9Y5U8 109 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 TRBV23-1A0A0A0MS06 115 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 PCP4L1A6NKN8 68 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 CCSO14618 274 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 OR5H8P0DN80 308 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 PI3P19957 117 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 LGALS7P47929 136 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 RPS27AP62979 156 aaKnown RBP9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 UBA52P62987 128 aaKnown RBP9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 OR8B12Q8NGG6 310 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 ZNF665Q9H7R5 613 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 RPS10P5Q9NQ39 176 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 TMEM38BQ9NVV0 291 aa9.46□□□□□ -0.9
SYNPO2-201ENST00000307142 DOCK8Q8NF50 2099 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 C9orf172C9J069 976 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 CYTIPO60759 359 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 FCGR3BO75015 233 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 FUCA1P04066 466 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 LSAMPQ13449 338 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 AVPI1Q5T686 147 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 BPIFCQ8NFQ6 507 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 COA4Q9NYJ1 87 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 TIMM9Q9Y5J7 89 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 PNPP00491 289 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 BPIFB3P59826 476 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 ZAR1Q86SH2 424 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 ADAMTS17Q8TE56 1095 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 GATA6Q92908 595 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 TICRRQ7Z2Z1 1910 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 COX7A2P2O60397 106 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 SYT6Q5T7P8 510 aaPredicted RBP9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 OR10P1Q8NGE3 313 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 ST8SIA2Q92186 375 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 AP1S3Q96PC3 154 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 ZNF230Q9UIE0 474 aaPredicted RBP9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 HRASP01112 189 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 CCL8P80075 99 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 NAAAQ02083 359 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 TMEM56Q96MV1 263 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 FAAP24Q9BTP7 215 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 STRAPQ9Y3F4 350 aaKnown RBP9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 RPS10-NUDT3A0A1W2PQS6 291 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 CDIPTO14735 213 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 NME2P1O60361 137 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 FADS1O60427 444 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 C1QAP02745 245 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 TCRBP04435 133 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 NME2P22392 152 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 FLI1Q01543 452 aaPredicted RBP9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 DUS3LQ96G46 650 aaKnown RBP9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 FGF20Q9NP95 211 aaPredicted RBP9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 PILRAQ9UKJ1 303 aa9.45□□□□□ -0.9
SYNPO2-201ENST00000307142 A0A0D9SG52 128 aa9.44□□□□□ -0.9
SYNPO2-201ENST00000307142 DFFBO76075 338 aa9.44□□□□□ -0.9
SYNPO2-201ENST00000307142 FPR2P25090 351 aa9.44□□□□□ -0.9
SYNPO2-201ENST00000307142 OPRK1P41145 380 aa9.44□□□□□ -0.9
SYNPO2-201ENST00000307142 Q3ZCU0 254 aa9.44□□□□□ -0.9
SYNPO2-201ENST00000307142 RFPL4BQ6ZWI9 263 aa9.44□□□□□ -0.9
SYNPO2-201ENST00000307142 ARHGEF39Q8N4T4 335 aa9.44□□□□□ -0.9
SYNPO2-201ENST00000307142 WNT2BQ93097 391 aa9.44□□□□□ -0.9
SYNPO2-201ENST00000307142 PRSS50Q9UI38 385 aa9.44□□□□□ -0.9
SYNPO2-201ENST00000307142 TMEM200CA6NKL6 621 aa9.44□□□□□ -0.9
SYNPO2-201ENST00000307142 GYPAP02724 150 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms