RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 SSX1Q16384 188 aa18.74■□□□□ 0.59
HOXD4-201ENST00000306324 MUC20Q8N307 709 aaPredicted RBP18.74■□□□□ 0.59
HOXD4-201ENST00000306324 TMEM165Q9HC07 324 aa18.74■□□□□ 0.59
HOXD4-201ENST00000306324 NOX4Q9NPH5 578 aa18.74■□□□□ 0.59
HOXD4-201ENST00000306324 POLDIP2Q9Y2S7 368 aa18.74■□□□□ 0.59
HOXD4-201ENST00000306324 SRRM5B3KS81 715 aa18.73■□□□□ 0.59
HOXD4-201ENST00000306324 IL2RGP31785 369 aa18.73■□□□□ 0.59
HOXD4-201ENST00000306324 TGFBR2P37173 567 aa18.73■□□□□ 0.59
HOXD4-201ENST00000306324 POU3F4P49335 361 aa18.73■□□□□ 0.59
HOXD4-201ENST00000306324 ZNF529Q6P280 563 aa18.73■□□□□ 0.59
HOXD4-201ENST00000306324 CEACAM19Q7Z692 300 aa18.73■□□□□ 0.59
HOXD4-201ENST00000306324 SPICQ8N5J4 248 aa18.73■□□□□ 0.59
HOXD4-201ENST00000306324 NR1H4Q96RI1 486 aaPredicted RBP18.73■□□□□ 0.59
HOXD4-201ENST00000306324 PKIBQ9C010 78 aa18.73■□□□□ 0.59
HOXD4-201ENST00000306324 WDR13Q9H1Z4 485 aa18.73■□□□□ 0.59
HOXD4-201ENST00000306324 PCDHB10Q9UN67 800 aa18.73■□□□□ 0.59
HOXD4-201ENST00000306324 SF3B6Q9Y3B4 125 aaKnown RBP18.73■□□□□ 0.59
HOXD4-201ENST00000306324 TRAV8-7A0A075B6U6 113 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 IGHV3OR15-7A0A075B7D8 119 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 OOEPA6NGQ2 149 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 LGALS8O00214 317 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 CCRL2O00421 344 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 PIN1P1O15428 100 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 INHBBP09529 407 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 GLRA1P23415 457 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 MPZP25189 248 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 PSMA1P25786 263 aaKnown RBP18.72■□□□□ 0.59
HOXD4-201ENST00000306324 GABRA5P31644 462 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 TMEM155Q4W5P6 130 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 FAM27D1Q5T7N8 215 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 SLC25A26Q70HW3 274 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 RNF144BQ7Z419 303 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 SATL1Q86VE3 508 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 BATF2Q8N1L9 274 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 OR5D18Q8NGL1 313 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 SEH1LQ96EE3 360 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 ZNF488Q96MN9 340 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 TMEM246Q9BRR3 403 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 VCX3AQ9NNX9 186 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 TMEM138Q9NPI0 162 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 NDUFB11Q9NX14 153 aa18.72■□□□□ 0.59
HOXD4-201ENST00000306324 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.71■□□□□ 0.59
HOXD4-201ENST00000306324 CSPG4Q6UVK1 2322 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 TRAV38-1A0A0B4J264 116 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 RGS9O75916 674 aaPredicted RBP18.71■□□□□ 0.59
HOXD4-201ENST00000306324 HEXAP06865 529 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 IGFBP3P17936 291 aaPredicted RBP18.71■□□□□ 0.59
HOXD4-201ENST00000306324 FSTP19883 344 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 BDKRB2P30411 391 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 IL24Q13007 206 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 KISS1Q15726 138 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 ZNF404Q494X3 552 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 UNQ9370/PRO34162Q6UXP9 181 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 OR52N4Q8NGI2 321 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 DNAJB11Q9UBS4 358 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 TLN2Q9Y4G6 2542 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.71■□□□□ 0.59
HOXD4-201ENST00000306324 SPRY1O43609 319 aaPredicted RBP18.71■□□□□ 0.59
HOXD4-201ENST00000306324 SC5DO75845 299 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 LMO4P61968 165 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 FABP5Q01469 135 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 MICBQ29980 383 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 TMEM249Q2WGJ8 235 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 DDI2Q5TDH0 399 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 FAM90A1Q86YD7 464 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 POC1AQ8NBT0 407 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 SLAMF9Q96A28 289 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 GPER1Q99527 375 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 ZNF665Q9H7R5 613 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 FOXJ3Q9UPW0 622 aa18.71■□□□□ 0.59
HOXD4-201ENST00000306324 MAGEA13PA6NCF6 341 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 CEACAM18A8MTB9 384 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 GPX5O75715 221 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 FSTL3O95633 263 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 CYB5AP00167 134 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 MAS1P04201 325 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 PGA5P0DJD9 388 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 KCNJ8Q15842 424 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 SYT6Q5T7P8 510 aaPredicted RBP18.7■□□□□ 0.58
HOXD4-201ENST00000306324 TMEM91Q6ZNR0 172 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 MKXQ8IYA7 352 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 TMIGD2Q96BF3 282 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 RAB39BQ96DA2 213 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 CPNE2Q96FN4 548 aaPredicted RBP18.7■□□□□ 0.58
HOXD4-201ENST00000306324 SNTG1Q9NSN8 517 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 ARHGAP32A7KAX9 2087 aa18.7■□□□□ 0.58
HOXD4-201ENST00000306324 MALRD1Q5VYJ5 2156 aa18.69■□□□□ 0.58
HOXD4-201ENST00000306324 GABRPO00591 440 aa18.69■□□□□ 0.58
HOXD4-201ENST00000306324 NXPH2O95156 264 aa18.69■□□□□ 0.58
HOXD4-201ENST00000306324 IGHV2-5P01817 119 aa18.69■□□□□ 0.58
HOXD4-201ENST00000306324 GYPAP02724 150 aa18.69■□□□□ 0.58
HOXD4-201ENST00000306324 ALDOBP05062 364 aa18.69■□□□□ 0.58
HOXD4-201ENST00000306324 FOSL1P15407 271 aa18.69■□□□□ 0.58
HOXD4-201ENST00000306324 MUC1P15941 1255 aaPredicted RBP18.69■□□□□ 0.58
HOXD4-201ENST00000306324 GP2P55259 537 aaKnown RBP18.69■□□□□ 0.58
HOXD4-201ENST00000306324 PDZK1IP1Q13113 114 aa18.69■□□□□ 0.58
HOXD4-201ENST00000306324 HSD17B12Q53GQ0 312 aa18.69■□□□□ 0.58
HOXD4-201ENST00000306324 TEX36Q5VZQ5 186 aa18.69■□□□□ 0.58
HOXD4-201ENST00000306324 DCDC5Q6ZRR9 648 aa18.69■□□□□ 0.58
HOXD4-201ENST00000306324 OR5T2Q8NGG2 359 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms