RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ZFP30Q9Y2G7 519 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 HRASP01112 189 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 PPIAP62937 165 aaKnown RBP12.09□□□□□ -0.47
TRIM56-201ENST00000306085 SOX4Q06945 474 aaPredicted RBP12.09□□□□□ -0.47
TRIM56-201ENST00000306085 OR5R1Q8NH85 324 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 IL36GQ9NZH8 169 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 A0A1W2PN81 502 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 MASP2O00187 686 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 SPRY3O43610 288 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 NFAT5O94916 1531 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 IL2RAP01589 272 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 COL9A3Q14050 684 aaPredicted RBP12.09□□□□□ -0.47
TRIM56-201ENST00000306085 OR2T10Q8NGZ9 312 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 EID2BQ96D98 161 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 PBOV1Q9GZY1 135 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 SP6Q3SY56 376 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 SPRED1Q7Z699 444 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 ZPBPQ9BS86 351 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 DUSP21Q9H596 190 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 ZNF749O43361 778 aa12.08□□□□□ -0.47
TRIM56-201ENST00000306085 CRYAAP02489 173 aa12.08□□□□□ -0.47
TRIM56-201ENST00000306085 AESQ08117 197 aa12.08□□□□□ -0.47
TRIM56-201ENST00000306085 TWIST1Q15672 202 aa12.08□□□□□ -0.47
TRIM56-201ENST00000306085 WDTC1Q8N5D0 677 aa12.08□□□□□ -0.47
TRIM56-201ENST00000306085 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.08□□□□□ -0.47
TRIM56-201ENST00000306085 RPEQ96AT9 228 aa12.08□□□□□ -0.47
TRIM56-201ENST00000306085 BEX4Q9NWD9 120 aaPredicted RBP12.08□□□□□ -0.47
TRIM56-201ENST00000306085 SMCHD1A6NHR9 2005 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 ISLRO14498 428 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 DNAL4O96015 105 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 RNFT1Q5M7Z0 435 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 SH2D2AQ9NP31 389 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 B4GALT1P15291 398 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 DLK2Q6UY11 383 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 OSR2Q8N2R0 312 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 FADS6Q8N9I5 356 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 HIST1H4GQ99525 98 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 FKBP11Q9NYL4 201 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 ELOA3CA0A087WX78 387 aaPredicted RBP12.08□□□□□ -0.48
TRIM56-201ENST00000306085 LIMK1P53667 647 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 GCSAMLQ5JQS6 135 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 SDK2Q58EX2 2172 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 UBE2L3P68036 154 aaKnown RBP12.08□□□□□ -0.48
TRIM56-201ENST00000306085 RHBDD2Q6NTF9 364 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 HAPLN2Q9GZV7 340 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 NUP98P52948 1817 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 IGSF23A1L1A6 192 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 FAM157AC9JC47 383 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 MROH1Q8NDA8 1641 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 C11orf87Q6NUJ2 197 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 CYS1Q717R9 158 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 SLC25A43Q8WUT9 341 aaPredicted RBP12.08□□□□□ -0.48
TRIM56-201ENST00000306085 SFRP2Q96HF1 295 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 INSM2Q96T92 566 aaPredicted RBP12.08□□□□□ -0.48
TRIM56-201ENST00000306085 GMLQ99445 158 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 MANBALQ9NQG1 85 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 MRPL54Q6P161 138 aaKnown RBP12.08□□□□□ -0.48
TRIM56-201ENST00000306085 SMIM19Q96E16 107 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 LINC00052Q96N35 136 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 ZNF391Q9UJN7 358 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 BEND2Q8NDZ0 799 aa12.08□□□□□ -0.48
TRIM56-201ENST00000306085 PPIHO43447 177 aaKnown RBP12.07□□□□□ -0.48
TRIM56-201ENST00000306085 LBX1P52954 281 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 CBARPQ8N350 705 aaPredicted RBP12.07□□□□□ -0.48
TRIM56-201ENST00000306085 TIMP4Q99727 224 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 RAXQ9Y2V3 346 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 TMEM30CPA0ZSE6 113 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 DIRC3C9JPN6 131 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 FCGR3BO75015 233 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 NAV3Q8IVL0 2385 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 TMEM129A0AVI4 362 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 FAM209BQ5JX69 171 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 MFSD2BA6NFX1 497 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 PYCARD-AS1I3L0S3 204 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 IGHA1P01876 353 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 IGHA2P01877 340 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 COL8A1P27658 744 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 TMEM128Q5BJH2 165 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 OR2W3Q7Z3T1 314 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 DYNLRB2Q8TF09 96 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 POU3F3P20264 500 aaPredicted RBP12.07□□□□□ -0.48
TRIM56-201ENST00000306085 PPP1CAP62136 330 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 TAS1R1Q7RTX1 841 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 OR13G1Q8NGZ3 307 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 BVESQ8NE79 360 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 PIK3IP1Q96FE7 263 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 PCOLCE2Q9UKZ9 415 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 VSIG4Q9Y279 399 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 OTPQ5XKR4 325 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 LYG1Q8N1E2 194 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 TCFL5Q9UL49 500 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 MCM3APO60318 1980 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 ZNF253O75346 499 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 F11P03951 625 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 EGR3Q06889 387 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 SMAGPQ0VAQ4 97 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 RGS7BPQ6MZT1 257 aaPredicted RBP12.07□□□□□ -0.48
TRIM56-201ENST00000306085 SLIT3O75094 1523 aa12.07□□□□□ -0.48
TRIM56-201ENST00000306085 FUT9Q9Y231 359 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms