RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 PCOLCE2Q9UKZ9 415 aa11.54□□□□□ -0.56
TRIM35-201ENST00000305364 DENND4AQ7Z401 1863 aa11.54□□□□□ -0.56
TRIM35-201ENST00000305364 FAM24AA6NFZ4 105 aa11.54□□□□□ -0.56
TRIM35-201ENST00000305364 ZNF217O75362 1048 aa11.54□□□□□ -0.56
TRIM35-201ENST00000305364 KLK2P20151 261 aa11.54□□□□□ -0.56
TRIM35-201ENST00000305364 DDTP30046 118 aa11.54□□□□□ -0.56
TRIM35-201ENST00000305364 TMEM240Q5SV17 173 aa11.54□□□□□ -0.56
TRIM35-201ENST00000305364 TMEM268Q5VZI3 342 aa11.54□□□□□ -0.56
TRIM35-201ENST00000305364 DOK3Q7L591 496 aa11.54□□□□□ -0.56
TRIM35-201ENST00000305364 LRRC18Q8N456 261 aa11.54□□□□□ -0.56
TRIM35-201ENST00000305364 SLC26A10Q8NG04 563 aa11.54□□□□□ -0.56
TRIM35-201ENST00000305364 TCAPO15273 167 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 SSSCA1O60232 199 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 ONECUT2O95948 504 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 ADIRFQ15847 76 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 PRRG4Q9BZD6 226 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 WWTR1Q9GZV5 400 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 SH3BGRL3Q9H299 93 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 FAM186AA6NE01 2351 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 CCDC187A0A096LP49 1063 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 DEDDO75618 318 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 SCGB1D1O95968 90 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 FBLP22087 321 aaKnown RBP11.53□□□□□ -0.56
TRIM35-201ENST00000305364 MMP16P51512 607 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 PKIAP61925 76 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 DCAF7P61962 342 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 HNRNPKP61978 463 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRIM35-201ENST00000305364 KISS1Q15726 138 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 C10orf91Q5T1B1 145 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 FAM166AQ6J272 317 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 LCN15Q6UWW0 184 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 BORCS8Q96FH0 119 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 RNF122Q9H9V4 155 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 CEP250Q9BV73 2442 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 ZNF16P17020 682 aaPredicted RBP11.53□□□□□ -0.56
TRIM35-201ENST00000305364 MDKP21741 143 aaPredicted RBP11.53□□□□□ -0.56
TRIM35-201ENST00000305364 TMEM164Q5U3C3 297 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 LYZL2Q7Z4W2 148 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 C8orf44Q96CB5 159 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 G6PC2Q9NQR9 355 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 WASF3Q9UPY6 502 aa11.53□□□□□ -0.56
TRIM35-201ENST00000305364 TRBV6-7A0A0A0MS04 114 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 SERPINE3A8MV23 424 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 H0YL77 283 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 IGHV2-70P01814 119 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 FAHP16930 419 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 HOXA5P20719 270 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 FGF7P21781 194 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 GPX4P36969 197 aaPredicted RBP11.52□□□□□ -0.56
TRIM35-201ENST00000305364 RABIFP47224 123 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 TMEM230Q96A57 120 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 TCTN2Q96GX1 697 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 ZNF286AQ9HBT8 521 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 CHST11Q9NPF2 352 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 PIGLQ9Y2B2 252 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 PLXNA2O75051 1894 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 ZNF106Q9H2Y7 1883 aaKnown RBP11.52□□□□□ -0.56
TRIM35-201ENST00000305364 KIAA1671Q9BY89 1806 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 H0YIG0 161 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 RER1O15258 196 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 IFNA1P01562 189 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 IGFBP3P17936 291 aaPredicted RBP11.52□□□□□ -0.56
TRIM35-201ENST00000305364 P2RY1P47900 373 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 FUT7Q11130 342 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 RTN4RL2Q86UN3 420 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 METTL9Q9H1A3 318 aa11.52□□□□□ -0.56
TRIM35-201ENST00000305364 ANGPTL7O43827 346 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 RBMXL2O75526 392 aaKnown RBP11.52□□□□□ -0.57
TRIM35-201ENST00000305364 PTGER4P35408 488 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 PYY3Q5JQD4 70 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 BEND4Q6ZU67 534 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 BATF2Q8N1L9 274 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 TUBA4BQ9H853 241 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 LMAN1LQ9HAT1 526 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 BCO1Q9HAY6 547 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 CUTCQ9NTM9 273 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 CEBPZOSA8MTT3 80 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 SHISA8B8ZZ34 492 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 RRADP55042 308 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 RPS23P62266 143 aaKnown RBP11.52□□□□□ -0.57
TRIM35-201ENST00000305364 PAQR4Q8N4S7 273 aaPredicted RBP11.52□□□□□ -0.57
TRIM35-201ENST00000305364 APCDD1LQ8NCL9 501 aa11.52□□□□□ -0.57
TRIM35-201ENST00000305364 LIN37Q96GY3 246 aaPredicted RBP11.52□□□□□ -0.57
TRIM35-201ENST00000305364 RP1P56715 2156 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 DENND4CQ5VZ89 1909 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 TGIF2-C20orf24A0A0A6YYL0 155 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 FRG2CA6NGY1 282 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 OR7C1O76099 320 aaPredicted RBP11.51□□□□□ -0.57
TRIM35-201ENST00000305364 DDAH2O95865 285 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 DANCRP0C864 163 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 BRICD5Q6PL45 260 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 C20orf196Q8IYI0 205 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 FRZBQ92765 325 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 KLHL13Q9P2N7 655 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 SRPK3Q9UPE1 567 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 IGHV3-20A0A0C4DH32 117 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 FAM221BA6H8Z2 402 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 ISG15P05161 165 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 PLAC9Q5JTB6 97 aa11.51□□□□□ -0.57
TRIM35-201ENST00000305364 FAM69BQ5VUD6 431 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms