RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 DAOP14920 347 aa22.89■■□□□ 1.25
HDAC3-201ENST00000305264 COL8A2P25067 703 aa22.89■■□□□ 1.25
HDAC3-201ENST00000305264 PDZK1IP1Q13113 114 aa22.89■■□□□ 1.25
HDAC3-201ENST00000305264 SPCS2Q15005 226 aa22.89■■□□□ 1.25
HDAC3-201ENST00000305264 OR4D6Q8NGJ1 314 aa22.89■■□□□ 1.25
HDAC3-201ENST00000305264 Q8TCH9 128 aa22.89■■□□□ 1.25
HDAC3-201ENST00000305264 TNFAIP8L1Q8WVP5 186 aa22.89■■□□□ 1.25
HDAC3-201ENST00000305264 C12orf43Q96C57 262 aaKnown RBP22.89■■□□□ 1.25
HDAC3-201ENST00000305264 PKIBQ9C010 78 aa22.89■■□□□ 1.25
HDAC3-201ENST00000305264 EDARQ9UNE0 448 aa22.89■■□□□ 1.25
HDAC3-201ENST00000305264 V9GY05 133 aa22.89■■□□□ 1.25
HDAC3-201ENST00000305264 SMIM31A0A1B0GVY4 71 aa22.88■■□□□ 1.25
HDAC3-201ENST00000305264 C3orf80F5H4A9 247 aa22.88■■□□□ 1.25
HDAC3-201ENST00000305264 CD37P11049 281 aa22.88■■□□□ 1.25
HDAC3-201ENST00000305264 PAX1P15863 534 aa22.88■■□□□ 1.25
HDAC3-201ENST00000305264 RPS19P39019 145 aaKnown RBP22.88■■□□□ 1.25
HDAC3-201ENST00000305264 ATP5J2P56134 94 aa22.88■■□□□ 1.25
HDAC3-201ENST00000305264 FOXB2Q5VYV0 432 aa22.88■■□□□ 1.25
HDAC3-201ENST00000305264 CDH26Q8IXH8 852 aa22.88■■□□□ 1.25
HDAC3-201ENST00000305264 BATF2Q8N1L9 274 aa22.88■■□□□ 1.25
HDAC3-201ENST00000305264 CCL17Q92583 94 aa22.88■■□□□ 1.25
HDAC3-201ENST00000305264 ERGIC1Q969X5 290 aa22.88■■□□□ 1.25
HDAC3-201ENST00000305264 VPS13CQ709C8 3753 aa22.88■■□□□ 1.25
HDAC3-201ENST00000305264 C1QL2Q7Z5L3 287 aa22.87■■□□□ 1.25
HDAC3-201ENST00000305264 PNLDC1Q8NA58 520 aaKnown RBP22.87■■□□□ 1.25
HDAC3-201ENST00000305264 ZNF488Q96MN9 340 aa22.87■■□□□ 1.25
HDAC3-201ENST00000305264 UQCC2Q9BRT2 126 aa22.87■■□□□ 1.25
HDAC3-201ENST00000305264 GSX2Q9BZM3 304 aa22.87■■□□□ 1.25
HDAC3-201ENST00000305264 IGKV1-12A0A0C4DH73 117 aa22.87■■□□□ 1.25
HDAC3-201ENST00000305264 IGKV1D-12P01611 117 aa22.87■■□□□ 1.25
HDAC3-201ENST00000305264 IL24Q13007 206 aa22.87■■□□□ 1.25
HDAC3-201ENST00000305264 RDH5Q92781 318 aa22.87■■□□□ 1.25
HDAC3-201ENST00000305264 SLAMF9Q96A28 289 aa22.87■■□□□ 1.25
HDAC3-201ENST00000305264 DCSTAMPQ9H295 470 aa22.87■■□□□ 1.25
HDAC3-201ENST00000305264 RSL24D1Q9UHA3 163 aaKnown RBP22.87■■□□□ 1.25
HDAC3-201ENST00000305264 SLC22A1O15245 554 aa22.86■■□□□ 1.25
HDAC3-201ENST00000305264 RP2O75695 350 aa22.86■■□□□ 1.25
HDAC3-201ENST00000305264 CYB5R3P00387 301 aaPredicted RBP22.86■■□□□ 1.25
HDAC3-201ENST00000305264 IL1AP01583 271 aa22.86■■□□□ 1.25
HDAC3-201ENST00000305264 TMEM225BP0DP42 221 aa22.86■■□□□ 1.25
HDAC3-201ENST00000305264 PTGFRP43088 359 aa22.86■■□□□ 1.25
HDAC3-201ENST00000305264 DEFB113Q30KQ7 82 aa22.86■■□□□ 1.25
HDAC3-201ENST00000305264 C1orf100Q5SVJ3 147 aa22.86■■□□□ 1.25
HDAC3-201ENST00000305264 USP43Q70EL4 1123 aa22.86■■□□□ 1.25
HDAC3-201ENST00000305264 LRRC29Q8WV35 223 aa22.86■■□□□ 1.25
HDAC3-201ENST00000305264 FOXRED1Q96CU9 486 aaPredicted RBP22.86■■□□□ 1.25
HDAC3-201ENST00000305264 PLGRKTQ9HBL7 147 aa22.86■■□□□ 1.25
HDAC3-201ENST00000305264 MTCH1Q9NZJ7 389 aa22.86■■□□□ 1.25
HDAC3-201ENST00000305264 AKR7A2O43488 359 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 HES5Q5TA89 166 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 CDH24Q86UP0 819 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 OR51F2Q8NH61 342 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 TMEM106BQ9NUM4 274 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 BEX4Q9NWD9 120 aaPredicted RBP22.85■■□□□ 1.25
HDAC3-201ENST00000305264 MRPS28Q9Y2Q9 187 aaKnown RBP22.85■■□□□ 1.25
HDAC3-201ENST00000305264 POLDIP2Q9Y2S7 368 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 SSX4O60224 188 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 PSMD7P51665 324 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 MRPS11P82912 194 aaKnown RBP22.85■■□□□ 1.25
HDAC3-201ENST00000305264 HFEQ30201 348 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 FAM166AQ6J272 317 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 ZNF525Q8N782 197 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 OR11L1Q8NGX0 322 aa22.85■■□□□ 1.25
HDAC3-201ENST00000305264 IFITM5A6NNB3 132 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 NOTOA8MTQ0 251 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 SLC17A2O00624 439 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 EGR1P18146 543 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 CLDN12P56749 244 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 GMFBP60983 142 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 AWAT2Q6E213 333 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 SFXN4Q6P4A7 337 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 GCSAMQ8N6F7 178 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 OR6M1Q8NGM8 313 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 NINJ1Q92982 152 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 SMURF1Q9HCE7 757 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 RNF7Q9UBF6 113 aa22.84■■□□□ 1.25
HDAC3-201ENST00000305264 F8VVB4 439 aa22.83■■□□□ 1.25
HDAC3-201ENST00000305264 F8VWA3 439 aa22.83■■□□□ 1.25
HDAC3-201ENST00000305264 PGA5P0DJD9 388 aa22.83■■□□□ 1.25
HDAC3-201ENST00000305264 SLC2A2P11168 524 aaPredicted RBP22.83■■□□□ 1.25
HDAC3-201ENST00000305264 HTR2CP28335 458 aa22.83■■□□□ 1.25
HDAC3-201ENST00000305264 RIN1Q13671 783 aa22.83■■□□□ 1.25
HDAC3-201ENST00000305264 ZNF181Q2M3W8 571 aa22.83■■□□□ 1.25
HDAC3-201ENST00000305264 FAM201AQ5SY85 155 aa22.83■■□□□ 1.25
HDAC3-201ENST00000305264 DLL4Q9NR61 685 aa22.83■■□□□ 1.25
HDAC3-201ENST00000305264 AIPO00170 330 aa22.83■■□□□ 1.24
HDAC3-201ENST00000305264 WNT9BO14905 357 aa22.83■■□□□ 1.24
HDAC3-201ENST00000305264 CFHR2P36980 270 aa22.83■■□□□ 1.24
HDAC3-201ENST00000305264 NPBWR2P48146 333 aa22.83■■□□□ 1.24
HDAC3-201ENST00000305264 P2RY14Q15391 338 aa22.83■■□□□ 1.24
HDAC3-201ENST00000305264 GLIPR1L1Q6UWM5 242 aa22.83■■□□□ 1.24
HDAC3-201ENST00000305264 MKXQ8IYA7 352 aa22.83■■□□□ 1.24
HDAC3-201ENST00000305264 BOLLQ8N9W6 283 aaKnown RBP22.83■■□□□ 1.24
HDAC3-201ENST00000305264 ZSCAN4Q8NAM6 433 aaPredicted RBP22.83■■□□□ 1.24
HDAC3-201ENST00000305264 ZNF671Q8TAW3 534 aa22.83■■□□□ 1.24
HDAC3-201ENST00000305264 HPS1Q92902 700 aa22.83■■□□□ 1.24
HDAC3-201ENST00000305264 SLC25A28Q96A46 364 aa22.83■■□□□ 1.24
HDAC3-201ENST00000305264 MBD6Q96DN6 1003 aa22.83■■□□□ 1.24
HDAC3-201ENST00000305264 C1orf147Q96MC9 270 aaPredicted RBP22.83■■□□□ 1.24
HDAC3-201ENST00000305264 WDR13Q9H1Z4 485 aa22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms