RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ZNF32P17041 273 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 CEACAM6P40199 344 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 TRMT61AQ96FX7 289 aaKnown RBP12.42□□□□□ -0.42
PRKCB-201ENST00000303531 P4HTMQ9NXG6 502 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 ARL2-SNX15V9GYD0 113 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
PRKCB-201ENST00000303531 POM121L2Q96KW2 1035 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 A0A1W2PR80 420 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 TO15178 435 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 HOXC4P09017 264 aaPredicted RBP12.42□□□□□ -0.42
PRKCB-201ENST00000303531 RAB32Q13637 225 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 IL11RAQ14626 422 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 PRSS42Q7Z5A4 293 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF707Q96C28 371 aaPredicted RBP12.42□□□□□ -0.42
PRKCB-201ENST00000303531 ERRFI1Q9UJM3 462 aaPredicted RBP12.42□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF391Q9UJN7 358 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 PAPPA2Q9BXP8 1791 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 MKRN2OSH3BPM6 223 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 CA6P23280 308 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 ZNRF4Q8WWF5 429 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 DBX1A6NMT0 343 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 C17orf78Q8N4C9 275 aa12.42□□□□□ -0.42
PRKCB-201ENST00000303531 SFTPA1Q8IWL2 248 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 TMEM230Q96A57 120 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 FAM60AQ9NP50 221 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 DNAJC13O75165 2243 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 NGFP01138 241 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 NQO2P16083 231 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 RNF212Q495C1 297 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 COMMD1Q8N668 190 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 ICE1Q9Y2F5 2266 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 SMCHD1A6NHR9 2005 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 TPRP12270 2363 aaKnown RBP12.41□□□□□ -0.42
PRKCB-201ENST00000303531 OR5H15A6NDH6 313 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 PABPC1L2AQ5JQF8 200 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 KCNK15Q9H427 330 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 ANKRD20A5PA0PJZ0 165 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 MBTPS2O43462 519 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 Q7L0L9 218 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 TAAR3PQ9P1P4 343 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 TIMM9Q9Y5J7 89 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 XKRY2A2RUG3 117 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 OR2A2Q6IF42 318 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 SLC24A4Q8NFF2 622 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 RASL12Q9NYN1 266 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 MRM2Q9UI43 246 aaKnown RBP12.41□□□□□ -0.42
PRKCB-201ENST00000303531 FFAR1O14842 300 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 MPC2O95563 127 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 CNN1P51911 297 aaKnown RBP12.41□□□□□ -0.42
PRKCB-201ENST00000303531 ERVFC1-1P60608 527 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 CD300CQ08708 224 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 RNPS1Q15287 305 aaKnown RBP12.41□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF766Q5HY98 468 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 OR4D11Q8NGI4 311 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 ARID1AO14497 2285 aa12.41□□□□□ -0.42
PRKCB-201ENST00000303531 PGA3P0DJD8 388 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 FCER1GP30273 86 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 OR5I1Q13606 314 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 DMKNQ6E0U4 476 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-201ENST00000303531 GVQW1Q8N7I0 195 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 NTNG2Q96CW9 530 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 C3orf85A0A1B0GTC6 90 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 C12orf10Q9HB07 376 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 TRA2AQ13595 282 aaKnown RBP eCLIP12.4□□□□□ -0.42
PRKCB-201ENST00000303531 UQCC1Q9NVA1 299 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 DEFB108AA8MXU0 73 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 NTN1O95631 604 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 SUMO1P63165 101 aaKnown RBP12.4□□□□□ -0.42
PRKCB-201ENST00000303531 HTRA4P83105 476 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-201ENST00000303531 MPPED2Q15777 294 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 STUMQ69YW2 141 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 MOB1BQ7L9L4 216 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 OR5C1Q8NGR4 320 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 OR10D3Q8NH80 312 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 OCIAD1Q9NX40 245 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 ETFDHQ16134 617 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF425Q6IV72 752 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 CLEC9AQ6UXN8 241 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 FZR1Q9UM11 496 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 SPP1P10451 314 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 OR10AD1Q8NGE0 317 aa12.4□□□□□ -0.42
PRKCB-201ENST00000303531 RAB5AP20339 215 aa12.4□□□□□ -0.43
PRKCB-201ENST00000303531 PPP1CBP62140 327 aa12.4□□□□□ -0.43
PRKCB-201ENST00000303531 ACER2Q5QJU3 275 aa12.4□□□□□ -0.43
PRKCB-201ENST00000303531 GGNBP1Q5YKI7 109 aa12.4□□□□□ -0.43
PRKCB-201ENST00000303531 ANGPTL6Q8NI99 470 aa12.4□□□□□ -0.43
PRKCB-201ENST00000303531 CHRDL1Q9BU40 450 aa12.4□□□□□ -0.43
PRKCB-201ENST00000303531 MEX3AA1L020 520 aaKnown RBP12.39□□□□□ -0.43
PRKCB-201ENST00000303531 MEOX1P50221 254 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 KRTDAPP60985 99 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 PJVKQ0ZLH3 352 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 FFAR4Q5NUL3 377 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 NAA60Q9H7X0 242 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 FBXO17Q96EF6 278 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 DUS4LO95620 317 aaKnown RBP12.39□□□□□ -0.43
PRKCB-201ENST00000303531 C8orf82Q6P1X6 216 aaPredicted RBP12.39□□□□□ -0.43
PRKCB-201ENST00000303531 DGAT2L6Q6ZPD8 337 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 SOX15O60248 233 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 ZXDAP98168 799 aa12.39□□□□□ -0.43
PRKCB-201ENST00000303531 MOB3BQ86TA1 216 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms