RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 AQP3Q92482 292 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 VSIG4Q9Y279 399 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 PIGLQ9Y2B2 252 aa19.16■□□□□ 0.66
TPM4-201ENST00000300933 AKIRIN2Q53H80 203 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 DCAF10Q5QP82 559 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 AVPI1Q5T686 147 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 SLC16A13Q7RTY0 426 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 TMED6Q8WW62 240 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 C1orf147Q96MC9 270 aaPredicted RBP19.15■□□□□ 0.66
TPM4-201ENST00000300933 FAM96BQ9Y3D0 163 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 BPNT1O95861 308 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 VAMP1P23763 118 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 MAGEA5P43359 124 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 PPP1R1AQ13522 171 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 C3AR1Q16581 482 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 CEACAM16Q2WEN9 425 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 PLAC9Q5JTB6 97 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 SULF2Q8IWU5 870 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 OR5AP2Q8NGF4 316 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 ADGRG7Q96K78 797 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 LPAR5Q9H1C0 372 aa19.15■□□□□ 0.66
TPM4-201ENST00000300933 ELL3Q9HB65 397 aaPredicted RBP19.15■□□□□ 0.66
TPM4-201ENST00000300933 ARID1AO14497 2285 aa19.14■□□□□ 0.66
TPM4-201ENST00000300933 A0A0B4J2A0 478 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 C13orf42A0A1B0GVH6 325 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 STMND1H3BQB6 276 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 TMEM229BQ8NBD8 167 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 OR2M7Q8NG81 312 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 OR10R2Q8NGX6 335 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 CNTNAP3BQ96NU0 1288 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 CST11Q9H112 138 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 ZFP57Q9NU63 452 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 SHPKQ9UHJ6 478 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 MEX3AA1L020 520 aaKnown RBP19.14■□□□□ 0.65
TPM4-201ENST00000300933 TMEM14DPA8MWL7 114 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 ZNF735P0CB33 412 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 ZNF32P17041 273 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 SNRPEP62304 92 aaKnown RBP19.14■□□□□ 0.65
TPM4-201ENST00000300933 GPR137CQ8N3F9 429 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 LINC00469Q8N7U9 141 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 KCNE4Q8WWG9 221 aa19.14■□□□□ 0.65
TPM4-201ENST00000300933 SGCEO43556 437 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 SNAPINO95295 136 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 ACAA1P09110 424 aaPredicted RBP19.13■□□□□ 0.65
TPM4-201ENST00000300933 NR2C1P13056 603 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 RAB6AP20340 208 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 HRH1P35367 487 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 GFRA1P56159 465 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 CXADRP78310 365 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 OR1C1Q15619 314 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 KISS1Q15726 138 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 FAM27BQ5VT28 67 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 OR4A4PQ8NGN8 299 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 TRAV20A0A0B4J274 112 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 SSX5O60225 188 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 PMP2P02689 132 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 IL13RA1P78552 427 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 CRIP3Q6Q6R5 217 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 IL22RA1Q8N6P7 574 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 ARL11Q969Q4 196 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 SGK3Q96BR1 496 aa19.13■□□□□ 0.65
TPM4-201ENST00000300933 CDC14BO60729 498 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 ERCC1P07992 297 aaPredicted RBP19.12■□□□□ 0.65
TPM4-201ENST00000300933 ZNF806P0C7X5 589 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 FCGR2AP12318 317 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 ACKR3P25106 362 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 PTGFRP43088 359 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 MRPS34P82930 218 aaKnown RBP19.12■□□□□ 0.65
TPM4-201ENST00000300933 FAM209BQ5JX69 171 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 RBMS3Q6XE24 437 aaKnown RBP19.12■□□□□ 0.65
TPM4-201ENST00000300933 PGAP1Q75T13 922 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 MAFIPQ8WZ33 124 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 GPR173Q9NS66 373 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 C5orf51A6NDU8 294 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 RAD51DO75771 328 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 MELTFP08582 738 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 AKR1C4P17516 323 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 SERPINA2P20848 420 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 CCL1P22362 96 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 TMEM50BP56557 158 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 POLR2GP62487 172 aaKnown RBP eCLIP19.12■□□□□ 0.65
TPM4-201ENST00000300933 NKAPLQ5M9Q1 402 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 LPCAT3Q6P1A2 487 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 DCUN1D4Q92564 292 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 PTX4Q96A99 478 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 ARHGAP5-AS1Q96IT6 56 aa19.12■□□□□ 0.65
TPM4-201ENST00000300933 AIMP2Q13155 320 aaKnown RBP19.11■□□□□ 0.65
TPM4-201ENST00000300933 RBM39Q14498 530 aaKnown RBP19.11■□□□□ 0.65
TPM4-201ENST00000300933 FOXL2NBQ6ZUU3 175 aa19.11■□□□□ 0.65
TPM4-201ENST00000300933 PIK3IP1Q96FE7 263 aa19.11■□□□□ 0.65
TPM4-201ENST00000300933 SF3B5Q9BWJ5 86 aaKnown RBP19.11■□□□□ 0.65
TPM4-201ENST00000300933 TMEM59Q9BXS4 323 aa19.11■□□□□ 0.65
TPM4-201ENST00000300933 HRH4Q9H3N8 390 aa19.11■□□□□ 0.65
TPM4-201ENST00000300933 TMEM38BQ9NVV0 291 aa19.11■□□□□ 0.65
TPM4-201ENST00000300933 LCATP04180 440 aa19.11■□□□□ 0.65
TPM4-201ENST00000300933 ZNF133P52736 654 aaPredicted RBP19.11■□□□□ 0.65
TPM4-201ENST00000300933 FOXG1P55316 489 aaPredicted RBP19.11■□□□□ 0.65
TPM4-201ENST00000300933 GALNTL5Q7Z4T8 443 aa19.11■□□□□ 0.65
TPM4-201ENST00000300933 FAM219AQ8IW50 185 aa19.11■□□□□ 0.65
TPM4-201ENST00000300933 TMEM9BQ9NQ34 198 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms