RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PIGQQ9BRB3 760 aa11.27□□□□□ -0.61
HIF3A-204ENST00000300862 CHST5Q9GZS9 411 aa11.27□□□□□ -0.61
HIF3A-204ENST00000300862 ZNF700Q9H0M5 742 aa11.27□□□□□ -0.61
HIF3A-204ENST00000300862 OSGIN2Q9Y236 505 aa11.27□□□□□ -0.61
HIF3A-204ENST00000300862 V9GYS6 101 aa11.27□□□□□ -0.61
HIF3A-204ENST00000300862 FRYQ5TBA9 3013 aa11.27□□□□□ -0.61
HIF3A-204ENST00000300862 A0A087WZY1 265 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 NSG1A0A0A6YYJ2 146 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 FAM230AA0A1W2PPH8 454 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 MEX3AA1L020 520 aaKnown RBP11.26□□□□□ -0.61
HIF3A-204ENST00000300862 DHRS7CA6NNS2 312 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 FOXI3A8MTJ6 420 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-204ENST00000300862 C9J4A7 227 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 CD79AP11912 226 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 FPR2P25090 351 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 THBS4P35443 961 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 CHRFAM7AQ494W8 412 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 ACTBL2Q562R1 376 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 ZNF774Q6NX45 483 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 LHFPL1Q86WI0 220 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 C20orf196Q8IYI0 205 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 MAML2Q8IZL2 1156 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-204ENST00000300862 AGBL5Q8NDL9 886 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 STOML3Q8TAV4 291 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 SFT2D1Q8WV19 159 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 ALKBH3Q96Q83 286 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-204ENST00000300862 NMES1Q9C002 83 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 CRLF2Q9HC73 371 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 OR2S2Q9NQN1 319 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 PRDM6Q9NQX0 595 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 TMEM100Q9NV29 134 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 NXT1Q9UKK6 140 aaKnown RBP11.26□□□□□ -0.61
HIF3A-204ENST00000300862 CCDC187A0A096LP49 1063 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 A0A0U1RQV5 110 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 F8VVB4 439 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 F8VWA3 439 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 ZNHIT1O43257 154 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 EIF1BO60739 113 aaKnown RBP11.26□□□□□ -0.61
HIF3A-204ENST00000300862 SFTPBP07988 381 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 NFYBP25208 207 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 FKBP2P26885 142 aaKnown RBP11.26□□□□□ -0.61
HIF3A-204ENST00000300862 RRADP55042 308 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 MTCP1P56278 107 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 S100A10P60903 97 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 RAB32Q13637 225 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 EXT1Q16394 746 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 AKR7LQ8NHP1 331 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 DYRK2Q92630 601 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 HAS2Q92819 552 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 INTS12Q96CB8 462 aaKnown RBP11.26□□□□□ -0.61
HIF3A-204ENST00000300862 NAA11Q9BSU3 229 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-204ENST00000300862 ZFP57Q9NU63 452 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 PLEKHJ1Q9NW61 149 aa11.26□□□□□ -0.61
HIF3A-204ENST00000300862 FOXD3Q9UJU5 478 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-204ENST00000300862 MSTNO14793 375 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 EIF3GO75821 320 aaKnown RBP eCLIP11.25□□□□□ -0.61
HIF3A-204ENST00000300862 SERPINA5P05154 406 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 GLAP06280 429 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 B4GALT1P15291 398 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 RPS2P15880 293 aaKnown RBP11.25□□□□□ -0.61
HIF3A-204ENST00000300862 TAF9Q16594 264 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 PEG10Q86TG7 708 aaKnown RBP11.25□□□□□ -0.61
HIF3A-204ENST00000300862 ARL11Q969Q4 196 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 FAAP24Q9BTP7 215 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 CYTL1Q9NRR1 136 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 TEX13DA0A0J9YY54 714 aaPredicted RBP11.25□□□□□ -0.61
HIF3A-204ENST00000300862 CEACAM18A8MTB9 384 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 ACAA1P09110 424 aaPredicted RBP11.25□□□□□ -0.61
HIF3A-204ENST00000300862 RFPL3SP0C7P2 107 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 NR2C1P13056 603 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 OTX1P32242 354 aaPredicted RBP11.25□□□□□ -0.61
HIF3A-204ENST00000300862 OPRM1P35372 400 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 MST1LQ2TV78 715 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 AVPI1Q5T686 147 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 BATF2Q8N1L9 274 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 SLC30A7Q8NEW0 376 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 OR2Y1Q8NGV0 311 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 PP6455Q8WZ26 134 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 NECAB3Q96P71 396 aaPredicted RBP11.25□□□□□ -0.61
HIF3A-204ENST00000300862 SMOC1Q9H4F8 434 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 RAB18Q9NP72 206 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 PCDHGA1Q9Y5H4 931 aa11.25□□□□□ -0.61
HIF3A-204ENST00000300862 FAM221AA4D161 298 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 SGCEO43556 437 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 VAMP5O95183 116 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 SNAPINO95295 136 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 CPT2P23786 658 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 OTX2P32243 289 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 ZNF84P51523 738 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 TAS2R46P59540 309 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 RAC1P63000 192 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 CYCSP99999 105 aaKnown RBP11.24□□□□□ -0.61
HIF3A-204ENST00000300862 AIMP2Q13155 320 aaKnown RBP11.24□□□□□ -0.61
HIF3A-204ENST00000300862 PDCD1Q15116 288 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 ZNF585AQ6P3V2 769 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 Q7L0L9 218 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 BAP18Q8IXM2 172 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 OR14L1PQ8NHC6 308 aa11.24□□□□□ -0.61
HIF3A-204ENST00000300862 SPTSSAQ969W0 71 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms