RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 LFNGQ8NES3 379 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 ABHD5Q8WTS1 349 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 TSLPQ969D9 159 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 PACRGQ96M98 296 aaPredicted RBP11.45□□□□□ -0.58
TVP23A-201ENST00000299866 PECRQ9BY49 303 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 ZNF319Q9P2F9 582 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 WASF3Q9UPY6 502 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 KCNIP3Q9Y2W7 256 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 TLCD2A6NGC4 264 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 PTBP3O95758 552 aaKnown RBP11.45□□□□□ -0.58
TVP23A-201ENST00000299866 BTF3P20290 206 aaKnown RBP11.45□□□□□ -0.58
TVP23A-201ENST00000299866 GABRR1P24046 479 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 SUCLG1P53597 346 aaKnown RBP11.45□□□□□ -0.58
TVP23A-201ENST00000299866 TFF2Q03403 129 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 C1orf61Q13536 156 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 SPPL3Q8TCT6 385 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 HPSE2Q8WWQ2 592 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 TMED3Q9Y3Q3 217 aa11.45□□□□□ -0.58
TVP23A-201ENST00000299866 NSG1A0A0A6YYJ2 146 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 SMCO3A2RU48 225 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 MS4A18H0YCH9 400 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 K7N7A8 449 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 IL2RGP31785 369 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 MS4A18Q3C1V0 323 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 PRSS58Q8IYP2 241 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 ASB10Q8WXI3 467 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 SHDQ96IW2 340 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 SNX22Q96L94 193 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 CYP8B1Q9UNU6 501 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 A0A087WZY1 265 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 CRYM-AS1A6NIL9 109 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 NPIPB7O75200 414 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 SRP19P09132 144 aaKnown RBP11.44□□□□□ -0.58
TVP23A-201ENST00000299866 TMEM225BP0DP42 221 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 CDAP32320 146 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 SPCS3P61009 180 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 TMEM176BQ3YBM2 270 aaPredicted RBP11.44□□□□□ -0.58
TVP23A-201ENST00000299866 ABCA11PQ4W5N1 156 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 HIST2H3PS2Q5TEC6 136 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 LRRC18Q8N456 261 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 OR8B12Q8NGG6 310 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 LIN37Q96GY3 246 aaPredicted RBP11.44□□□□□ -0.58
TVP23A-201ENST00000299866 VN1R1Q9GZP7 353 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 NXT1Q9UKK6 140 aaKnown RBP11.44□□□□□ -0.58
TVP23A-201ENST00000299866 MCTS1Q9ULC4 181 aaKnown RBP11.44□□□□□ -0.58
TVP23A-201ENST00000299866 A6NIZ1 184 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 STMND1H3BQB6 276 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 SLC33A1O00400 549 aaPredicted RBP11.44□□□□□ -0.58
TVP23A-201ENST00000299866 RRADP55042 308 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 BIDP55957 195 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 ZNF121P58317 390 aaPredicted RBP11.44□□□□□ -0.58
TVP23A-201ENST00000299866 RAP1BP61224 184 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 HLA-DQA1Q5Y7H0 255 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 FAM57BQ71RH2 274 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 C17orf78Q8N4C9 275 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 NAXEQ8NCW5 288 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 NIPSNAP3BQ9BS92 247 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 UNKLQ9H9P5 680 aaKnown RBP11.44□□□□□ -0.58
TVP23A-201ENST00000299866 AK3Q9UIJ7 227 aa11.44□□□□□ -0.58
TVP23A-201ENST00000299866 ELOA3CA0A087WX78 387 aaPredicted RBP11.43□□□□□ -0.58
TVP23A-201ENST00000299866 FAM24AA6NFZ4 105 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 ZNF724A8MTY0 619 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 IFNA10P01566 189 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 CTSDP07339 412 aaPredicted RBP11.43□□□□□ -0.58
TVP23A-201ENST00000299866 PGA4P0DJD7 388 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 PGA5P0DJD9 388 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 OPRM1P35372 400 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 PLCXD2Q0VAA5 305 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 DPPA2Q7Z7J5 298 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 SUMF1Q8NBK3 374 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 OR5L1Q8NGL2 311 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 TVP23CQ96ET8 276 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 FAM210BQ96KR6 192 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 IGKV1-9A0A0C4DH69 117 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 ATP6V0CP27449 155 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 G0S2P27469 103 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 HSD17B7P56937 341 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 OR8G1Q15617 311 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 SLC46A1Q96NT5 459 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 KCNK17Q96T54 332 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 ATG101Q9BSB4 218 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 WSB1Q9Y6I7 421 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 SPAG17Q6Q759 2223 aa11.43□□□□□ -0.58
TVP23A-201ENST00000299866 RP1P56715 2156 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 CCDC163A0A0D9SF12 145 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 ZNF850A8MQ14 1090 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 GEMIN2O14893 280 aaKnown RBP11.42□□□□□ -0.58
TVP23A-201ENST00000299866 OPN1LWP04000 364 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 OR5H8P0DN80 308 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 LMO1P25800 156 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 NOVA1P51513 510 aaKnown RBP11.42□□□□□ -0.58
TVP23A-201ENST00000299866 HSD11B2P80365 405 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 HSF1Q00613 529 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 TLE3Q04726 772 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 GPR157Q5UAW9 335 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 CARD17Q5XLA6 110 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 STT3BQ8TCJ2 826 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 MVB12AQ96EY5 273 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 RNF208Q9H0X6 261 aa11.42□□□□□ -0.58
TVP23A-201ENST00000299866 LIME1Q9H400 295 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms