RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 FAM71E2Q8N5Q1 922 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 FRYQ5TBA9 3013 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 THBS4P35443 961 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 H3F3AP84243 136 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 PCOLCEQ15113 449 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 RPUSD3Q6P087 351 aaKnown RBP21.28■■□□□ 1
SPTSSA-201ENST00000298130 OR9K2Q8NGE7 335 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 AKR7LQ8NHP1 331 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 FNDC9Q8TBE3 224 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 MARS2Q96GW9 593 aaKnown RBP21.28■■□□□ 1
SPTSSA-201ENST00000298130 SRXN1Q9BYN0 137 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 CNTNAP3Q9BZ76 1288 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 AK3Q9UIJ7 227 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 V9GYS6 101 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 A0A0J9YW62 118 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 OR8U9P0C7N5 309 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 OR5H8P0DN80 308 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 LYL1P12980 280 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 TMEM33P57088 247 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 PIGYQ3MUY2 71 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 OR5T2Q8NGG2 359 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 OR8U1Q8NH10 309 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 SLC25A43Q8WUT9 341 aaPredicted RBP21.27■■□□□ 1
SPTSSA-201ENST00000298130 TP53I11O14683 189 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 EIF1P41567 113 aaKnown RBP21.27■■□□□ 1
SPTSSA-201ENST00000298130 KCNJ3P48549 501 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 ASCL1P50553 236 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 PIGPP57054 158 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 LSM6P62312 80 aaKnown RBP21.27■■□□□ 1
SPTSSA-201ENST00000298130 PDZK1IP1Q13113 114 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 COL19A1Q14993 1142 aa21.27■■□□□ 1
SPTSSA-201ENST00000298130 RCC2Q9P258 522 aaKnown RBP21.27■■□□□ 1
SPTSSA-201ENST00000298130 PTRH2Q9Y3E5 179 aaKnown RBP21.27■■□□□ 1
SPTSSA-201ENST00000298130 RNASEK-C17orf49H0YIS7 233 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 ZIC3O60481 467 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 F10P00742 488 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 IGLV3-1P01715 115 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 FHITP49789 147 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 Q6ZRG5 221 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 SGPP2Q8IWX5 399 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 ALKBH3Q96Q83 286 aaPredicted RBP21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 C1orf123Q9NWV4 160 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 C19orf25Q9UFG5 118 aaPredicted RBP21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 NDRG3Q9UGV2 375 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 PADI1Q9ULC6 663 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 CARHSP1Q9Y2V2 147 aaKnown RBP21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 SERPINE3A8MV23 424 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 CRYBA1P05813 215 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 RSU1Q15404 277 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 STK11Q15831 433 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 YRDCQ86U90 279 aaKnown RBP21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 ZIC4Q8N9L1 334 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 RXFP4Q8TDU9 374 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 SULT4A1Q9BR01 284 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 PROK2Q9HC23 129 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 DKKL1Q9UK85 242 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 MRPS17Q9Y2R5 130 aaKnown RBP21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 PCDHGA1Q9Y5H4 931 aa21.26■□□□□ 0.99
SPTSSA-201ENST00000298130 SPP1P10451 314 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 MR1Q95460 341 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 PCED1AQ9H1Q7 454 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 ESRP2Q9H6T0 727 aaKnown RBP21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 UBE2ZQ9H832 354 aaPredicted RBP21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 SNAPINO95295 136 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 LCATP04180 440 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 CCL4P13236 92 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 B4GALT1P15291 398 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 CAV2P51636 162 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 MRPL14Q6P1L8 145 aaKnown RBP21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 TMEM123Q8N131 208 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 OR11L1Q8NGX0 322 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 AKR1E2Q96JD6 320 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 ANXA10Q9UJ72 324 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 URB1O60287 2271 aaKnown RBP21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 A0A0G2JMM0 328 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 A0A1W2PPB8 328 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 A0A1W2PRS3 328 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 KIR3DP1A8MWS1 328 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 GEMIN2O14893 280 aaKnown RBP21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 C1QL1O75973 258 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 OR5AC1P0C628 307 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 EPHA8P29322 1005 aaPredicted RBP21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 C10orf91Q5T1B1 145 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 LYZL2Q7Z4W2 148 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 OR5L1Q8NGL2 311 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 SMIM8Q96KF7 97 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 Q96M66 194 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 SEC11CQ9BY50 192 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 CRLF2Q9HC73 371 aa21.25■□□□□ 0.99
SPTSSA-201ENST00000298130 NME2P1O60361 137 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 PET100P0DJ07 73 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 TGIF1Q15583 401 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 DHRS7BQ6IAN0 325 aaPredicted RBP21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 PLXDC2Q6UX71 529 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 TMEM156Q8N614 296 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 SECTM1Q8WVN6 248 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 TMEM54Q969K7 222 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 TM2D1Q9BX74 207 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 CHRDQ9H2X0 955 aa21.24■□□□□ 0.99
SPTSSA-201ENST00000298130 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.24■□□□□ 0.991e-6■■■■■ 31.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms