RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 IGKV1-8A0A0C4DH67 115 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 CTDSPLO15194 276 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 PIN1P1O15428 100 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 PTGER4P35408 488 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 SNCAP37840 140 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 PIGPP57054 158 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 SLC37A1P57057 533 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 TOMM34Q15785 309 aaPredicted RBP11.96□□□□□ -0.49
HPS3-201ENST00000296051 ALKBH6Q3KRA9 238 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 RNF212Q495C1 297 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 C17orf78Q8N4C9 275 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 SARGQ9BW04 601 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 ZCCHC4Q9H5U6 513 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 CNTD2Q9H8S5 307 aa11.96□□□□□ -0.49
HPS3-201ENST00000296051 CACNA1AO00555 2505 aa11.96□□□□□ -0.5
HPS3-201ENST00000296051 A0A1W2PPH5 198 aa11.96□□□□□ -0.5
HPS3-201ENST00000296051 TMEM229AB2RXF0 380 aa11.96□□□□□ -0.5
HPS3-201ENST00000296051 IGHV4-34P06331 123 aa11.96□□□□□ -0.5
HPS3-201ENST00000296051 CD226Q15762 336 aa11.96□□□□□ -0.5
HPS3-201ENST00000296051 LGI3Q8N145 548 aa11.96□□□□□ -0.5
HPS3-201ENST00000296051 PLK3Q9H4B4 646 aa11.96□□□□□ -0.5
HPS3-201ENST00000296051 PATZ1Q9HBE1 687 aaKnown RBP11.96□□□□□ -0.5
HPS3-201ENST00000296051 NOTCH3Q9UM47 2321 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 FAHP16930 419 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 NKX2-1P43699 371 aaPredicted RBP11.95□□□□□ -0.5
HPS3-201ENST00000296051 INSM1Q01101 510 aaPredicted RBP11.95□□□□□ -0.5
HPS3-201ENST00000296051 ZIC1Q15915 447 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 SPATA46Q5T0L3 261 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 OR2A2Q6IF42 318 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 CMTM3Q96MX0 182 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 TOLLIPQ9H0E2 274 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 PPP1R14DQ9NXH3 145 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 HLA-HP01893 362 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 GP1BAP07359 652 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 RPS4XP62701 263 aaKnown RBP11.95□□□□□ -0.5
HPS3-201ENST00000296051 ZNF718Q3SXZ3 478 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 EMC4Q5J8M3 183 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 RNF128Q8TEB7 428 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 RTN4IP1Q8WWV3 396 aaPredicted RBP11.95□□□□□ -0.5
HPS3-201ENST00000296051 WNK3Q9BYP7 1800 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 CREBBPQ92793 2442 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 MFSD2BA6NFX1 497 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 C4orf51C9J302 202 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 DSCR4P56555 118 aaPredicted RBP11.95□□□□□ -0.5
HPS3-201ENST00000296051 NHLRC3Q5JS37 347 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 TMEM268Q5VZI3 342 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 WDR5BQ86VZ2 330 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 ADAD2Q8NCV1 583 aaKnown RBP11.95□□□□□ -0.5
HPS3-201ENST00000296051 NT5CQ8TCD5 201 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 COX14Q96I36 57 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 GCM1Q9NP62 436 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 IGHV5-10-1A0A0J9YXX1 117 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 ABCD4O14678 606 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 SSSCA1O60232 199 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 ZNF83P51522 516 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 ZNF266Q14584 549 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 RAB35Q15286 201 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 OR8G2PQ6IF36 304 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 UQCC3Q6UW78 93 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 ANKRD37Q7Z713 158 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 PLEKHA3Q9HB20 300 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 MMP26Q9NRE1 261 aa11.95□□□□□ -0.5
HPS3-201ENST00000296051 GAR1Q9NY12 217 aaKnown RBP11.95□□□□□ -0.5
HPS3-201ENST00000296051 GDF2Q9UK05 429 aaPredicted RBP11.95□□□□□ -0.5
HPS3-201ENST00000296051 MDC1Q14676 2089 aaKnown RBP11.94□□□□□ -0.5
HPS3-201ENST00000296051 HSD17B6O14756 317 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 HOXC4P09017 264 aaPredicted RBP11.94□□□□□ -0.5
HPS3-201ENST00000296051 ZNF705AQ6ZN79 300 aaPredicted RBP11.94□□□□□ -0.5
HPS3-201ENST00000296051 OR1J1Q8NGS3 322 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 RAB33BQ9H082 229 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 RASL12Q9NYN1 266 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 DTX4Q9Y2E6 619 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 SNRNP200O75643 2136 aaKnown RBP11.94□□□□□ -0.5
HPS3-201ENST00000296051 M0R135 149 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 DHHO43323 396 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 ZNF121P58317 390 aaPredicted RBP11.94□□□□□ -0.5
HPS3-201ENST00000296051 MPPED2Q15777 294 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 OR2T2Q6IF00 324 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 PLXDC2Q6UX71 529 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 EMG1Q92979 244 aaKnown RBP11.94□□□□□ -0.5
HPS3-201ENST00000296051 ZNF799Q96GE5 643 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 OXGR1Q96P68 337 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 GPR87Q9BY21 358 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 SLC39A9Q9NUM3 307 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 CRHP06850 196 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 AADACL3Q5VUY0 350 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 TLNRD1Q9H1K6 362 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 FBXL17Q9UF56 701 aa11.94□□□□□ -0.5
HPS3-201ENST00000296051 LAP3P28838 519 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 NPBWR1P48145 328 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 FOXL2P58012 376 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 TLE4Q04727 773 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 C2orf68Q2NKX9 166 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 ZNF425Q6IV72 752 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 HDGFL3Q9Y3E1 203 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 HS3ST1O14792 307 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 TAAR5O14804 337 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 EPPINO95925 133 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 MESTQ5EB52 335 aa11.93□□□□□ -0.5
HPS3-201ENST00000296051 TSPO2Q5TGU0 170 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms