RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TRAV14DV4A0A0A6YYC5 116 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 MFSD2BA6NFX1 497 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 WDR1O75083 606 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 OR2F2O95006 317 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 IGLV3-1P01715 115 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 MGMTP16455 207 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 ZP3P21754 424 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 OTX1P32242 354 aaPredicted RBP14.6□□□□□ -0.07
CPSF4-201ENST00000292476 CBX5P45973 191 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 PRKXP51817 358 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 SORDQ00796 357 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 KLRB1Q12918 225 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 OR2F1Q13607 317 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 SCGB2B2Q4G0G5 96 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 NSUN5P2Q63ZY6 315 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 DRAM2Q6UX65 266 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 NUFIP2Q7Z417 695 aaKnown RBP14.6□□□□□ -0.07
CPSF4-201ENST00000292476 ANGPTL5Q86XS5 388 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 CHST4Q8NCG5 386 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 SSC4DQ8WTU2 575 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 MITD1Q8WV92 249 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 GAL3ST1Q99999 423 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 REG4Q9BYZ8 158 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 LUZP4Q9P127 313 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 MRPS28Q9Y2Q9 187 aaKnown RBP14.6□□□□□ -0.07
CPSF4-201ENST00000292476 DNAJC13O75165 2243 aa14.6□□□□□ -0.07
CPSF4-201ENST00000292476 OR6C6A6NF89 314 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 HLA-AP01891 365 aaKnown RBP14.59□□□□□ -0.07
CPSF4-201ENST00000292476 ALDH3B1P43353 468 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 ARF1P84077 181 aaKnown RBP14.59□□□□□ -0.07
CPSF4-201ENST00000292476 TGFBR3Q03167 851 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 ACSF3Q4G176 576 aaPredicted RBP14.59□□□□□ -0.07
CPSF4-201ENST00000292476 Q6ZSR3 168 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 NAA40Q86UY6 237 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 OR52H1Q8NGJ2 320 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 OR5M9Q8NGP3 310 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 OR1F12Q8NHA8 337 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 C1orf147Q96MC9 270 aaPredicted RBP14.59□□□□□ -0.07
CPSF4-201ENST00000292476 PHB2Q99623 299 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 LPAR5Q9H1C0 372 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 ZMAT3Q9HA38 289 aaKnown RBP14.59□□□□□ -0.07
CPSF4-201ENST00000292476 GPR84Q9NQS5 396 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.59□□□□□ -0.07
CPSF4-201ENST00000292476 PFDN2Q9UHV9 154 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 NOP16Q9Y3C1 178 aaKnown RBP14.59□□□□□ -0.07
CPSF4-201ENST00000292476 ZNF462Q96JM2 2506 aa14.59□□□□□ -0.07
CPSF4-201ENST00000292476 A0A0U1RQV5 110 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 FIGNL2A6NMB9 653 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 CEACAM18A8MTB9 384 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 M0R135 149 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 IGHV3-9P01782 118 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 CRHP06850 196 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 PRF1P14222 555 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 ZNF32P17041 273 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 ARR3P36575 388 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 VAX1Q5SQQ9 334 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 SFRP5Q5T4F7 317 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.58□□□□□ -0.07
CPSF4-201ENST00000292476 ZNF546Q86UE3 836 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 ARRDC1Q8N5I2 433 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 KCNRGQ8N5I3 272 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 EIF4E3Q8N5X7 224 aaKnown RBP14.58□□□□□ -0.07
CPSF4-201ENST00000292476 OR4S1Q8NGB4 309 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 NANOS1Q8WY41 292 aaKnown RBP14.58□□□□□ -0.07
CPSF4-201ENST00000292476 C10orf35Q96D05 121 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 ZNF799Q96GE5 643 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 PGAM5Q96HS1 289 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 SLC25A32Q9H2D1 315 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 SDHAF2Q9NX18 166 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 COMMD9Q9P000 198 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 MYEF2Q9P2K5 600 aaKnown RBP14.58□□□□□ -0.07
CPSF4-201ENST00000292476 ZNF391Q9UJN7 358 aa14.58□□□□□ -0.07
CPSF4-201ENST00000292476 CACNA1CQ13936 2221 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 SPENQ96T58 3664 aaKnown RBP14.58□□□□□ -0.08
CPSF4-201ENST00000292476 OR5H14A6NHG9 310 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 F5H5K5 113 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 SYNGR3O43761 229 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 IFNA6P05013 189 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 FCER2P06734 321 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 HIST1H1DP16402 221 aaKnown RBP14.58□□□□□ -0.08
CPSF4-201ENST00000292476 THBS4P35443 961 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 ZNF660Q6AZW8 331 aaPredicted RBP14.58□□□□□ -0.08
CPSF4-201ENST00000292476 ZNF585AQ6P3V2 769 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 GLIPR1L1Q6UWM5 242 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 PLXDC2Q6UX71 529 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 OVCH2Q7RTZ1 564 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 SKA3Q8IX90 412 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 CCDC36Q8IYA8 594 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 ZNF101Q8IZC7 436 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 OR56B1Q8NGI3 324 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 NUDCD2Q8WVJ2 157 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 URM1Q9BTM9 101 aaKnown RBP14.58□□□□□ -0.08
CPSF4-201ENST00000292476 SELENOIQ9C0D9 397 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 OR2H1Q9GZK4 316 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 NARFLQ9H6Q4 476 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 ZNF224Q9NZL3 707 aa14.58□□□□□ -0.08
CPSF4-201ENST00000292476 C9orf170A2RU37 121 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 ZSCAN5BA6NJL1 495 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 KRBOX1C9JBD0 128 aa14.57□□□□□ -0.08
CPSF4-201ENST00000292476 SSX5O60225 188 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms