RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 PRR27Q6MZM9 219 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 EXTL1Q92935 676 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 MENTQ9BUN1 341 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 THBS4P35443 961 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 TAS2R45P59539 299 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 ZNF345Q14585 488 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 KISS1Q15726 138 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 ADGRG7Q96K78 797 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 NRTNQ99748 197 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 HDGFL3Q9Y3E1 203 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 TRAPPC1Q9Y5R8 145 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 TRBV23-1A0A0A0MS06 115 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 SOX15O60248 233 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 ARR3P36575 388 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 LIMK1P53667 647 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 ALG14Q96F25 216 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 MRPS2Q9Y399 296 aaKnown RBP14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 TERTO14746 1132 aaKnown RBP14.71□□□□□ -0.06
SH3RF1-201ENST00000284637 SFT2D2O95562 160 aa14.71□□□□□ -0.06
SH3RF1-201ENST00000284637 OR4D11Q8NGI4 311 aa14.71□□□□□ -0.06
SH3RF1-201ENST00000284637 FGF14Q92915 247 aa14.71□□□□□ -0.06
SH3RF1-201ENST00000284637 IER2Q9BTL4 223 aa14.71□□□□□ -0.06
SH3RF1-201ENST00000284637 SERTM1A2A2V5 107 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 EPPINO95925 133 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 DDTP30046 118 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 RPL7L1Q6DKI1 246 aaKnown RBP14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 SLC26A10Q8NG04 563 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 FBXO17Q96EF6 278 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 CIB3Q96Q77 187 aaPredicted RBP14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 TSPAN32Q96QS1 320 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 RAB33BQ9H082 229 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 PITPNC1Q9UKF7 332 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 KIF13AQ9H1H9 1805 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 SLC31A2O15432 143 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 FUT3P21217 361 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 GPM6AP51674 278 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 FUT6P51993 359 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 PPP1CBP62140 327 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 HLA-DRB3P79483 266 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 MYBPHQ13203 477 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 WDR34Q96EX3 536 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 MS4A3Q96HJ5 214 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 CCR5P51681 352 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 GNB1P62873 340 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 RAC1P63000 192 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 ARL16Q0P5N6 197 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 FOXO1Q12778 655 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 PNRC1Q12796 327 aaPredicted RBP14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 SPATA46Q5T0L3 261 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 FAM162BQ5T6X4 162 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 ADPRHL1Q8NDY3 354 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 NRIP2Q9BQI9 281 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 SCN1AP35498 2009 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 ITGB4P16144 1822 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 YIF1AO95070 293 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 KRASP01116 189 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 FCER1GP30273 86 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 OR5I1Q13606 314 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 NHLRC3Q5JS37 347 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 C6orf15Q6UXA7 325 aaPredicted RBP14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 VASH2Q86V25 355 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 SLC24A4Q8NFF2 622 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 IFI44Q8TCB0 444 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 FBLIM1Q8WUP2 373 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 SPOCK3Q9BQ16 436 aa14.7□□□□□ -0.06
SH3RF1-201ENST00000284637 A0A1W2PPE2 198 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 GLULP15104 373 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 SELEP16581 610 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 C6orf201Q7Z4U5 140 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 DYRK2Q92630 601 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 SNX22Q96L94 193 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 TRBV5-3A0A0A0MS03 114 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 GALR2O43603 387 aaPredicted RBP14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 ADAP1O75689 374 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 CRHP06850 196 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 CT45A10P0DMU9 189 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 CD200P41217 278 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 DMWDQ09019 674 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 UBE2V2Q15819 145 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 TMEM215Q68D42 235 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 DMKNQ6E0U4 476 aaPredicted RBP14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 ZNF547Q8IVP9 402 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 PLPPR2Q96GM1 343 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 FAAP24Q9BTP7 215 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 PCM1Q15154 2024 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 CDRT15L2A8MXV6 281 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 ZNF17P17021 662 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 SHHQ15465 462 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 PRICKLE4Q2TBC4 344 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 ZNF660Q6AZW8 331 aaPredicted RBP14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 OR1N1Q8NGS0 311 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 FBXL17Q9UF56 701 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 F12P00748 615 aaPredicted RBP14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 CXCL10P02778 98 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 FGF2P09038 288 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 LGALS4P56470 323 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 RBPJQ06330 500 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 CBLN3Q6UW01 205 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 MOGAT1Q96PD6 335 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 ZFP64Q9NPA5 681 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms