RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PLEKHS1Q5SXH7 462 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 DPPA3Q6W0C5 159 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF676Q8N7Q3 588 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 EXD3Q8N9H8 876 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 ZFP62Q8NB50 900 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 ELOA3Q8NG57 546 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 OR51G1Q8NGK1 321 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 KTI12Q96EK9 354 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 IMMP2LQ96T52 175 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 CTDSP1Q9GZU7 261 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 SDF2L1Q9HCN8 221 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 LYRM2Q9NU23 88 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 MRM2Q9UI43 246 aaKnown RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 DENND4CQ5VZ89 1909 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 IGLV3-27P01718 113 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 FAHP16930 419 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 GLRA1P23415 457 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 TNFSF4P23510 183 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 OR1D2P34982 312 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 HINT1P49773 126 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 CLDN2P57739 230 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 RPS20P60866 119 aaKnown RBP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 RAB11AP62491 216 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 RPL23AP62750 156 aaKnown RBP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 RHOGP84095 191 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF92Q03936 586 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 EXOSC7Q15024 291 aaKnown RBP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 GLYATL3Q5SZD4 288 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 ASPHD2Q6ICH7 369 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 CATSPERDQ86XM0 798 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF595Q8IYB9 648 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 CLDND2Q8NHS1 167 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 PTPMT1Q8WUK0 201 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 REEP6Q96HR9 211 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 ADOQ96SZ5 270 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 RTBDNQ9BSG5 229 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 ALG12Q9BV10 488 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 RNF208Q9H0X6 261 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF703Q9H7S9 590 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 SOHLH2Q9NX45 425 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 AHSPQ9NZD4 102 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 CLN8Q9UBY8 286 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 SERTAD3Q9UJW9 196 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 GPR137BO60478 399 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 TBX19O60806 448 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 LILRA1O75019 489 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 MTX2O75431 263 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 CXCL10P02778 98 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 CTSDP07339 412 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 TACSTD2P09758 323 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 JMJD7P0C870 316 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 LGALS7P47929 136 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF136P52737 540 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 RPS24P62847 133 aaKnown RBP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 TCEAL5Q5H9L2 206 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 C9orf50Q5SZB4 431 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 CNKSR3Q6P9H4 555 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF709Q8N972 641 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 OR2M7Q8NG81 312 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 NKD1Q969G9 470 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 FGGYQ96C11 551 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 DCBLD2Q96PD2 775 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 KLHDC3Q9BQ90 382 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 PLSCR4Q9NRQ2 329 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 WIPI2Q9Y4P8 454 aa8.12□□□□□ -1.11
PDGFC-201ENST00000274071 ZFP37Q9Y6Q3 630 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-201ENST00000274071 SERTM2A0A1B0GWG4 89 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 TMEM202A6NGA9 273 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF814B7Z6K7 855 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 CORTO00230 105 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 SNAI3Q3KNW1 292 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 SLC8B1Q6J4K2 584 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 Q6ZN92 141 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 RFLNAQ6ZTI6 216 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 CSNK1A1LQ8N752 337 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 LPAR4Q99677 370 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 KXD1Q9BQD3 176 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 EFCAB11Q9BUY7 163 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 NUDT9Q9BW91 350 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 CKLFQ9UBR5 152 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 MAP1LC3B2A6NCE7 125 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 DDAH2O95865 285 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 CKMP06732 381 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 TCN2P20062 427 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 CCKBRP32239 447 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 COMPP49747 757 aaPredicted RBP8.11□□□□□ -1.11
PDGFC-201ENST00000274071 RAB38P57729 211 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 MCEMP1Q8IX19 187 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 RCBTB1Q8NDN9 531 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 OR8G5Q8NG78 346 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 OR2G3Q8NGZ4 309 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 CPT1CQ8TCG5 803 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 FAM216AQ8WUB2 273 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 NMNAT3Q96T66 252 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 TXN2Q99757 166 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 MAP1LC3BQ9GZQ8 125 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 UQCR10Q9UDW1 63 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 TBX21Q9UL17 535 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms