RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 C4orf46Q504U0 113 aa14.32□□□□□ -0.12
CCDC40-201ENST00000269318 RFPL4BQ6ZWI9 263 aa14.32□□□□□ -0.12
CCDC40-201ENST00000269318 TMED4Q7Z7H5 227 aa14.32□□□□□ -0.12
CCDC40-201ENST00000269318 ZDHHC22Q8N966 263 aa14.32□□□□□ -0.12
CCDC40-201ENST00000269318 ASCC1Q8N9N2 400 aaKnown RBP14.32□□□□□ -0.12
CCDC40-201ENST00000269318 MRPS24Q96EL2 167 aaKnown RBP14.32□□□□□ -0.12
CCDC40-201ENST00000269318 OR2A7Q96R45 310 aa14.32□□□□□ -0.12
CCDC40-201ENST00000269318 DKK4Q9UBT3 224 aa14.32□□□□□ -0.12
CCDC40-201ENST00000269318 HSF4Q9ULV5 492 aa14.32□□□□□ -0.12
CCDC40-201ENST00000269318 GIPP09681 153 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-201ENST00000269318 GABRA6Q16445 453 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 TAF9Q16594 264 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 C2orf68Q2NKX9 166 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 RTL6Q6ICC9 239 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 VWA1Q6PCB0 445 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 MYPOPQ86VE0 399 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-201ENST00000269318 CCDC36Q8IYA8 594 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 CNEP1R1Q8N9A8 125 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 ZSCAN4Q8NAM6 433 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-201ENST00000269318 OR2AK2Q8NG84 335 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 OR2T35Q8NGX2 323 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 OR6K3Q8NGY3 331 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 SNIP1Q8TAD8 396 aaKnown RBP14.31□□□□□ -0.12
CCDC40-201ENST00000269318 SLA2Q9H6Q3 261 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 FN3KRPQ9HA64 309 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 PLEKHJ1Q9NW61 149 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 ZNF581Q9P0T4 197 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 MGAT4AQ9UM21 535 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 SSUH2Q9Y2M2 353 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 URB1O60287 2271 aaKnown RBP14.31□□□□□ -0.12
CCDC40-201ENST00000269318 CD300LBA8K4G0 201 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 H3BUI4 141 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 K7EM74 188 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 LYZL6O75951 148 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 IFNA6P05013 189 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 COX5AP20674 150 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 UBE2MP61081 183 aaKnown RBP14.31□□□□□ -0.12
CCDC40-201ENST00000269318 CEACAM21Q3KPI0 293 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 OR2A2Q6IF42 318 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 C17orf107Q6ZR85 190 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 OSR2Q8N2R0 312 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 ARRDC1Q8N5I2 433 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 RBMXL3Q8N7X1 1067 aaKnown RBP14.31□□□□□ -0.12
CCDC40-201ENST00000269318 ZNF611Q8N823 705 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 OR51F2Q8NH61 342 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 EMG1Q92979 244 aaKnown RBP14.31□□□□□ -0.12
CCDC40-201ENST00000269318 BOD1Q96IK1 185 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 ZNF629Q9UEG4 869 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-201ENST00000269318 ZNF230Q9UIE0 474 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-201ENST00000269318 HSPB11Q9Y547 144 aa14.31□□□□□ -0.12
CCDC40-201ENST00000269318 DOCK7Q96N67 2140 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 MSTNO14793 375 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 TPOP07202 933 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 CELA3BP08861 270 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 DNASE1P24855 282 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 CHATP28329 748 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 EIF2S3P41091 472 aaKnown RBP14.3□□□□□ -0.12
CCDC40-201ENST00000269318 FOXF2Q12947 444 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 PIGYQ3MUY2 71 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 NKAPLQ5M9Q1 402 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 NSUN5P2Q63ZY6 315 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 SLC25A42Q86VD7 318 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 ZDHHC23Q8IYP9 409 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 FBXL14Q8N1E6 418 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 FTMTQ8N4E7 242 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 NAXEQ8NCW5 288 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 Q8NFD4 153 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 ST6GALNAC5Q9BVH7 336 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 GON7Q9BXV9 100 aa14.3□□□□□ -0.12
CCDC40-201ENST00000269318 J3QW42 95 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 GEMIN2O14893 280 aaKnown RBP14.29□□□□□ -0.12
CCDC40-201ENST00000269318 AMY2BP19961 511 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 SPINK2P20155 84 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 SNU13P55769 128 aaKnown RBP14.29□□□□□ -0.12
CCDC40-201ENST00000269318 UBE2NP61088 152 aaKnown RBP14.29□□□□□ -0.12
CCDC40-201ENST00000269318 SNRPD2P62316 118 aaKnown RBP14.29□□□□□ -0.12
CCDC40-201ENST00000269318 DAZAP2Q15038 168 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-201ENST00000269318 TBC1D28Q2M2D7 210 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 RPUSD3Q6P087 351 aaKnown RBP14.29□□□□□ -0.12
CCDC40-201ENST00000269318 SLC25A26Q70HW3 274 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 OR5L1Q8NGL2 311 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 CHIAQ9BZP6 476 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 PRRC2CQ9Y520 2896 aaKnown RBP14.29□□□□□ -0.12
CCDC40-201ENST00000269318 LAMA5O15230 3695 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 CACNA1GO43497 2377 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 A0A1W2PR80 420 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 CEACAM18A8MTB9 384 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 H2BFSP57053 126 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 RAP2BP61225 183 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 DHRS2Q13268 280 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 ZNF585AQ6P3V2 769 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 SEM1Q6ZVN7 128 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 OR5H2Q8NGV7 314 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 TERB2Q8NHR7 220 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 GRPEL2Q8TAA5 225 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 WDR89Q96FK6 387 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-201ENST00000269318 RADILQ96JH8 1075 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 FAAP24Q9BTP7 215 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 PCDHB16Q9NRJ7 776 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 PLSCR4Q9NRQ2 329 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms