RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 PQLC2LA1A4F0 135 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 CRYM-AS1A6NIL9 109 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 PRSS44E7EML9 344 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 H0YIZ8 118 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 CCSO14618 274 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 B4GALT1P15291 398 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 ALKAL2Q6UX46 152 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 TMEM17Q86X19 198 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 ZNF845Q96IR2 970 aaPredicted RBP9.66□□□□□ -0.86
MSH3-201ENST00000265081 THOC3Q96J01 351 aaKnown RBP9.66□□□□□ -0.86
MSH3-201ENST00000265081 VRK1Q99986 396 aaPredicted RBP9.66□□□□□ -0.86
MSH3-201ENST00000265081 GPR173Q9NS66 373 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 LRFN1Q9P244 771 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 B8ZZF3 427 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 NME2P1O60361 137 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 NME2P22392 152 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 ZNF92Q03936 586 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 ABHD3Q8WU67 409 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 PIK3IP1Q96FE7 263 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 IP6K3Q96PC2 410 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 ALKBH3Q96Q83 286 aaPredicted RBP9.66□□□□□ -0.86
MSH3-201ENST00000265081 REPIN1Q9BWE0 567 aaKnown RBP9.66□□□□□ -0.86
MSH3-201ENST00000265081 LIME1Q9H400 295 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 KRBOX1C9JBD0 128 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 BET1O15155 118 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 CSN2P05814 226 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 HOXD4P09016 255 aaPredicted RBP9.66□□□□□ -0.86
MSH3-201ENST00000265081 AMY2BP19961 511 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 SERPINA2P20848 420 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 GDF1P27539 372 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 SERPINF1P36955 418 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 STARP49675 285 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 RBP2P50120 134 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 PRSS54Q6PEW0 395 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 OR2AE1Q8NHA4 323 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 TTTY12Q9BZ98 90 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 ANXA10Q9UJ72 324 aa9.66□□□□□ -0.86
MSH3-201ENST00000265081 CST4P01036 141 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 FCGR3AP08637 254 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 PTGER4P35408 488 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 UCP3P55916 312 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 PDZK1IP1Q13113 114 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 DCAF10Q5QP82 559 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 SPINK14Q6IE38 97 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 SLC39A7Q92504 469 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 FGF23Q9GZV9 251 aaPredicted RBP9.65□□□□□ -0.86
MSH3-201ENST00000265081 PPA2Q9H2U2 334 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 ACKR4Q9NPB9 350 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 DNAJB11Q9UBS4 358 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 ZNF816-ZNF321PA0A0X1KG74 233 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 ZNF587BE7ETH6 402 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 DLSTP36957 453 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 NPY4RP50391 375 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 TSPO2Q5TGU0 170 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 C6orf201Q7Z4U5 140 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 PDZD9Q8IXQ8 264 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 RRNAD1Q96FB5 475 aaKnown RBP9.65□□□□□ -0.86
MSH3-201ENST00000265081 GALNT14Q96FL9 552 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 BOD1Q96IK1 185 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 RCC2Q9P258 522 aaKnown RBP9.65□□□□□ -0.86
MSH3-201ENST00000265081 AK3Q9UIJ7 227 aa9.65□□□□□ -0.86
MSH3-201ENST00000265081 TPD52L2O43399 206 aaKnown RBP9.65□□□□□ -0.87
MSH3-201ENST00000265081 NRASP01111 189 aa9.65□□□□□ -0.87
MSH3-201ENST00000265081 AKR1C4P17516 323 aa9.65□□□□□ -0.87
MSH3-201ENST00000265081 MTCP1P56278 107 aa9.65□□□□□ -0.87
MSH3-201ENST00000265081 GLRX5Q86SX6 157 aa9.65□□□□□ -0.87
MSH3-201ENST00000265081 ZNF75AQ96N20 296 aa9.65□□□□□ -0.87
MSH3-201ENST00000265081 LINC00052Q96N35 136 aa9.65□□□□□ -0.87
MSH3-201ENST00000265081 ARPC5LQ9BPX5 153 aa9.65□□□□□ -0.87
MSH3-201ENST00000265081 CHMP1AQ9HD42 196 aaPredicted RBP9.65□□□□□ -0.87
MSH3-201ENST00000265081 MBD2Q9UBB5 411 aa9.65□□□□□ -0.87
MSH3-201ENST00000265081 I3L521 148 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 CD79AP11912 226 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 HTR5AP47898 357 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 AIMP2Q13155 320 aaKnown RBP9.64□□□□□ -0.87
MSH3-201ENST00000265081 TMEM200AQ86VY9 491 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 STPG2Q8N412 459 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 OR10AD1Q8NGE0 317 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 OR5D18Q8NGL1 313 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 OR10K1Q8NGX5 313 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 AKR7LQ8NHP1 331 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 COQ8AQ8NI60 647 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 PCNPQ8WW12 178 aaKnown RBP9.64□□□□□ -0.87
MSH3-201ENST00000265081 RDH8Q9NYR8 311 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 CACNA1CQ13936 2221 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 LOC100509620A0A075B734 347 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 LIPCP11150 499 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 RSPO4Q2I0M5 234 aaPredicted RBP9.64□□□□□ -0.87
MSH3-201ENST00000265081 TFAP2EQ6VUC0 442 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 C17orf50Q8WW18 174 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 PLSCR2Q9NRY7 297 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 COMMD9Q9P000 198 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 ZNF503-AS2A6NEH8 195 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 CELA3AP09093 270 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 RBM11P57052 281 aaKnown RBP9.64□□□□□ -0.87
MSH3-201ENST00000265081 CSNK2A3Q8NEV1 391 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 C2orf50Q96LR7 162 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 SULT4A1Q9BR01 284 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 GP6Q9HCN6 339 aa9.64□□□□□ -0.87
MSH3-201ENST00000265081 EHFQ9NZC4 300 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms