RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 HIST2H2BEQ16778 126 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 LIAT1Q6ZQX7 453 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 Q8WTZ3 238 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 HIST1H2BHQ93079 126 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 BSCL2Q96G97 398 aaPredicted RBP10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 HIST1H2BNQ99877 126 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 HIST1H2BMQ99879 126 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 WWTR1Q9GZV5 400 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 PLEKHJ1Q9NW61 149 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 ANXA10Q9UJ72 324 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 ANKUB1A6NFN9 424 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 HSD17B6O14756 317 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 WISP1O95388 367 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 CD63P08962 238 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 IL11P20809 199 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 OR1D4P47884 311 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 CLRN1P58418 232 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 DLK1P80370 383 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 CLEC9AQ6UXN8 241 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 CCDC54Q8NEL0 328 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 OR2G3Q8NGZ4 309 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 OR14L1PQ8NHC6 308 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 RTN4IP1Q8WWV3 396 aaPredicted RBP10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 MARS2Q96GW9 593 aaKnown RBP10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 RARRES2Q99969 163 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 PLA2G2FQ9BZM2 168 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 ALKBH4Q9NXW9 302 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 LHFPL6Q9Y693 200 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 CPAMD8Q8IZJ3 1885 aa10.87□□□□□ -0.67
CHMP2B-201ENST00000263780 ARHGEF17Q96PE2 2063 aaPredicted RBP10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 IGKV3D-11A0A0A0MRZ8 115 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 A0A1B0GV90 55 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 A0A1W2PNV4 684 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 C17orf51A8MQB3 221 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 ZNF724A8MTY0 619 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 RAMP1O60894 148 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 DIRAS3O95661 229 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 HBE1P02100 147 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 SRP19P09132 144 aaKnown RBP10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 COL9A1P20849 921 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 SUMO3P55854 103 aaPredicted RBP10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 ZNF124Q15973 351 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 SSX2Q16385 188 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 BEND4Q6ZU67 534 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 C9orf40Q8IXQ3 194 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 LILRB2Q8N423 598 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 ZNF283Q8N7M2 679 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 OR14K1Q8NGZ2 314 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 OR5R1Q8NH85 324 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 RBMXL1Q96E39 390 aaKnown RBP10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 C18orf12Q96KH6 178 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 SSX3Q99909 188 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 SLC25A31Q9H0C2 315 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 A0A087X0M5 115 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 A0A1B0GX30 115 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 ZNF727A8MUV8 499 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 C5orf67F2Z3F1 127 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 KLF8O95600 359 aaPredicted RBP10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 IGHG1P01857 330 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 ZNF17P17021 662 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 DTYMKP23919 212 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 RND3P61587 244 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 MYO7AQ13402 2215 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 OR2T2Q6IF00 324 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 SFTPA2Q8IWL1 248 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 OR13H1Q8NG92 308 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 PP6455Q8WZ26 134 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 GNPNAT1Q96EK6 184 aaPredicted RBP10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 MRPL13Q9BYD1 178 aaKnown RBP10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 TCEAL2Q9H3H9 227 aaPredicted RBP10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 SOHLH2Q9NX45 425 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 CACNA1IQ9P0X4 2223 aa10.86□□□□□ -0.67
CHMP2B-201ENST00000263780 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 IGKV1-9A0A0C4DH69 117 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 VSTM2BA6NLU5 285 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 DHRS7CA6NNS2 312 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 CYB5BO43169 146 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 XRCC2O43543 280 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 OR5AC1P0C628 307 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 TMEM225BP0DP42 221 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 ZNF43P17038 809 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 RGS19P49795 217 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 SRPXP78539 464 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 NHLH2Q02577 135 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 ZNF506Q5JVG8 444 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 SPNS3Q6ZMD2 512 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 FAM57BQ71RH2 274 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 CCDC71LQ8N9Z2 235 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 TSLPQ969D9 159 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 RHOVQ96L33 236 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 CAPNS2Q96L46 248 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 C2orf88Q9BSF0 95 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 ELL3Q9HB65 397 aaPredicted RBP10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 SDHAF3Q9NRP4 125 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 RCL1Q9Y2P8 373 aaKnown RBP10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 PTPRSQ13332 1948 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 A0A1B0GV50 99 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 SMCO3A2RU48 225 aa10.85□□□□□ -0.67
CHMP2B-201ENST00000263780 ZNF726A6NNF4 738 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms