RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 ATF1P18846 271 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 FGF9P31371 208 aaPredicted RBP15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 RNPS1Q15287 305 aaKnown RBP15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 ZNF429Q86V71 674 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 RPEL1Q2QD12 228 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 OR5D13Q8NGL4 314 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 PHYHIPLQ96FC7 376 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 IER2Q9BTL4 223 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 ABCD3P28288 659 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 FAM27D1Q5T7N8 215 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 SLC16A12Q6ZSM3 486 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 PATE1Q8WXA2 126 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 SLIRPQ9GZT3 109 aaKnown RBP15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 SLC35B3Q9H1N7 401 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 SLC22A13Q9Y226 551 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 FUT3P21217 361 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 FBXO4Q9UKT5 387 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 POMT2Q9UKY4 750 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 PMS2P11Q13670 270 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 CLLU1Q5K131 121 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 RGS7BPQ6MZT1 257 aaPredicted RBP15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 M0QZK8 103 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 GGCTO75223 188 aaKnown RBP15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 EPHA2P29317 976 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 ABLIM2Q6H8Q1 611 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 RAB40CQ96S21 281 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 HES4Q9HCC6 221 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 RALYQ9UKM9 306 aaKnown RBP15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 RNASEKQ6P5S7 137 aaKnown RBP15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 TMEM56Q96MV1 263 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 EDEM2Q9BV94 578 aa15.69■□□□□ 0.1
NOTCH3-201ENST00000263388 LMO7DNF2Z398 122 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 GGNBP1Q5YKI7 109 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 GPANK1O95872 356 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 ANKRD34CP0C6C1 535 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 GOSR1O95249 250 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 CST4P01036 141 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 SRFP11831 508 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 AGERQ15109 404 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 KIRREL2Q6UWL6 708 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 CALHM3Q86XJ0 350 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 GNG3P63215 75 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 ELOBQ15370 118 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 INSM1Q01101 510 aaPredicted RBP15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 MYBPHQ13203 477 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 Q6ZNB5 142 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 SLC2A9Q9NRM0 540 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 MLF1P58340 268 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 TRAT1Q6PIZ9 186 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 C8orf44Q96CB5 159 aa15.68■□□□□ 0.1
NOTCH3-201ENST00000263388 LILRA5A6NI73 299 aa15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 RGS13O14921 159 aa15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 NDUFB6O95139 128 aa15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 GCSHP23434 173 aa15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 ZNF66Q6ZN08 573 aa15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 SH2D5Q6ZV89 423 aa15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 AP5S1Q9NUS5 200 aa15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 ATG101Q9BSB4 218 aa15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 SEBOXQ9HB31 216 aaPredicted RBP15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 HELTA6NFD8 242 aa15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 DHRS3O75911 302 aa15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 LRFN3Q9BTN0 628 aa15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 PHF7Q9BWX1 381 aaPredicted RBP15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 SMAD4Q13485 552 aaKnown RBP15.67■□□□□ 0.1
NOTCH3-201ENST00000263388 A0A1B0GTQ1 180 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 A6NDN8 102 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 PLA1AQ53H76 456 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 PCDHGA9Q9Y5G4 932 aaKnown RBP15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 GATCO43716 136 aaKnown RBP15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 TNFRSF1AP19438 455 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 PPP2CAP67775 309 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 SLC36A1Q7Z2H8 476 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 FGF2P09038 288 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 OR5AL1P0C617 328 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 PPOXP50336 477 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 WFDC8Q8IUA0 241 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 SPICQ8N5J4 248 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 GPR137Q96N19 417 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 TNFRSF12AQ9NP84 129 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 NAT8BQ9UHF3 227 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 FBXL6Q8N531 539 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 OR2V1Q8NHB1 315 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 C5orf52A6NGY3 159 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 ACY3Q96HD9 319 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 WDFY2Q96P53 400 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 COL24A1Q17RW2 1714 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 MBTPS2O43462 519 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 KIAA1958Q8N8K9 716 aa15.66■□□□□ 0.1
NOTCH3-201ENST00000263388 CST7O76096 145 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 CRYBB2P43320 205 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 KISS1Q15726 138 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 OR10C1Q96KK4 312 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 TAAR9Q96RI9 348 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 ING1Q9UK53 422 aaPredicted RBP15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 ETFBKMTQ8IXQ9 262 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 UBALD2Q8IYN6 164 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 ALKBH3Q96Q83 286 aaPredicted RBP15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 TRPM7Q96QT4 1865 aa15.65■□□□□ 0.1
NOTCH3-201ENST00000263388 DHRS2Q13268 280 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms