RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 PYDC2Q56P42 97 aa11.33□□□□□ -0.6
SGCA-201ENST00000262018 C1orf100Q5SVJ3 147 aa11.33□□□□□ -0.6
SGCA-201ENST00000262018 TRIQKQ629K1 86 aa11.33□□□□□ -0.6
SGCA-201ENST00000262018 LYPD6Q86Y78 171 aa11.33□□□□□ -0.6
SGCA-201ENST00000262018 OR1M1Q8NGA1 313 aa11.33□□□□□ -0.6
SGCA-201ENST00000262018 OR51A2Q8NGJ7 313 aa11.33□□□□□ -0.6
SGCA-201ENST00000262018 OR5D14Q8NGL3 314 aa11.33□□□□□ -0.6
SGCA-201ENST00000262018 BCL2L2Q92843 193 aaPredicted RBP11.33□□□□□ -0.6
SGCA-201ENST00000262018 FOXRED1Q96CU9 486 aaPredicted RBP11.33□□□□□ -0.6
SGCA-201ENST00000262018 FAM71F1Q96KD3 344 aaPredicted RBP11.33□□□□□ -0.6
SGCA-201ENST00000262018 RNF121Q9H920 327 aa11.33□□□□□ -0.6
SGCA-201ENST00000262018 C14orf119Q9NWQ9 140 aa11.33□□□□□ -0.6
SGCA-201ENST00000262018 A0A096LPE4 126 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 A0A1W2PPZ6 126 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 DHRS3O75911 302 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 HOXB1P14653 301 aaPredicted RBP11.32□□□□□ -0.6
SGCA-201ENST00000262018 ZNF20P17024 532 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 RAB3AP20336 220 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 BDKRB2P30411 391 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 ARR3P36575 388 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 CLDN12P56749 244 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 HILS1P60008 231 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 RAB11BQ15907 218 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 TBRG1Q3YBR2 411 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 PYHIN1Q6K0P9 492 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 TMEM53Q6P2H8 277 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 PGAP1Q75T13 922 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 COMMD2Q86X83 199 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 CCDC36Q8IYA8 594 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 CMTM4Q8IZR5 234 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 CPEB3Q8NE35 698 aaKnown RBP11.32□□□□□ -0.6
SGCA-201ENST00000262018 SLC25A28Q96A46 364 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 SGK3Q96BR1 496 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 C10orf35Q96D05 121 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 SLC25A38Q96DW6 304 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 C7orf50Q9BRJ6 194 aaKnown RBP11.32□□□□□ -0.6
SGCA-201ENST00000262018 ABCG5Q9H222 651 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 OBP2BQ9NPH6 170 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 AMDHD2Q9Y303 409 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 RHBDD3Q9Y3P4 386 aa11.32□□□□□ -0.6
SGCA-201ENST00000262018 VWFP04275 2813 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 M0R1B8 84 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 MAGEB3O15480 346 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 MTRF1O75570 445 aaKnown RBP11.31□□□□□ -0.6
SGCA-201ENST00000262018 UBL3O95164 117 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 HLA-HP01893 362 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 APOBEC3AP31941 199 aaPredicted RBP11.31□□□□□ -0.6
SGCA-201ENST00000262018 THBS4P35443 961 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 GNALP38405 381 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 PITPNBP48739 271 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 INPP1P49441 399 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 UBE2NP61088 152 aaKnown RBP11.31□□□□□ -0.6
SGCA-201ENST00000262018 MRPS10P82664 201 aaKnown RBP11.31□□□□□ -0.6
SGCA-201ENST00000262018 SCGB2A2Q13296 93 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 SNAI3Q3KNW1 292 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 HIKESHIQ53FT3 197 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 CCBE1Q6UXH8 406 aaPredicted RBP11.31□□□□□ -0.6
SGCA-201ENST00000262018 CDH26Q8IXH8 852 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 Q8N402 240 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 OR6M1Q8NGM8 313 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 RAB40AQ8WXH6 277 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 VRK1Q99986 396 aaPredicted RBP11.31□□□□□ -0.6
SGCA-201ENST00000262018 C1QTNF5Q9BXJ0 243 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 RGCCQ9H4X1 137 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 MOV10Q9HCE1 1003 aaKnown RBP11.31□□□□□ -0.6
SGCA-201ENST00000262018 MYOZ1Q9NP98 299 aaPredicted RBP11.31□□□□□ -0.6
SGCA-201ENST00000262018 TMEM138Q9NPI0 162 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 B3GNT2Q9NY97 397 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 ZNF391Q9UJN7 358 aa11.31□□□□□ -0.6
SGCA-201ENST00000262018 A0A0G2JMP0 313 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 A0A0X1KG70 313 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 A0A1W2PQ09 198 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 ZNF503-AS2A6NEH8 195 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 DHRS7CA6NNS2 312 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 CTDSPLO15194 276 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 LCATP04180 440 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 ALDOBP05062 364 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 ERCC1P07992 297 aaPredicted RBP11.3□□□□□ -0.6
SGCA-201ENST00000262018 DVL1P1P54792 670 aaPredicted RBP11.3□□□□□ -0.6
SGCA-201ENST00000262018 MADCAM1Q13477 382 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 GFOD2Q3B7J2 385 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 COLCA1Q6ZS62 124 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 OR5AS1Q8N127 324 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 OR4M2Q8NGB6 313 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 SYNPRQ8TBG9 265 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 HPS1Q92902 700 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 MRPL24Q96A35 216 aaKnown RBP11.3□□□□□ -0.6
SGCA-201ENST00000262018 FAM3DQ96BQ1 224 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 HAVCR1Q96D42 359 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 NEURL2Q9BR09 285 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 NOX3Q9HBY0 568 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 COPZ2Q9P299 210 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 CGGBP1Q9UFW8 167 aaPredicted RBP11.3□□□□□ -0.6
SGCA-201ENST00000262018 SLC25A15Q9Y619 301 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 ARFGEF3Q5TH69 2177 aa11.3□□□□□ -0.6
SGCA-201ENST00000262018 LOC100509620A0A075B734 347 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 A0A1W2PR80 420 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 A6NIN4 97 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 SULT1B1O43704 296 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms