RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 FPR2P25090 351 aa10.79□□□□□ -0.68
COL8A1-201ENST00000261037 TMEM128Q5BJH2 165 aa10.79□□□□□ -0.68
COL8A1-201ENST00000261037 B3GNTL1Q67FW5 361 aaPredicted RBP10.79□□□□□ -0.68
COL8A1-201ENST00000261037 C11orf87Q6NUJ2 197 aa10.79□□□□□ -0.68
COL8A1-201ENST00000261037 CADM4Q8NFZ8 388 aa10.79□□□□□ -0.68
COL8A1-201ENST00000261037 RHOFQ9HBH0 211 aa10.79□□□□□ -0.68
COL8A1-201ENST00000261037 LSM2Q9Y333 95 aaKnown RBP10.79□□□□□ -0.68
COL8A1-201ENST00000261037 S100A4P26447 101 aaKnown RBP10.78□□□□□ -0.68
COL8A1-201ENST00000261037 RNPS1Q15287 305 aaKnown RBP10.78□□□□□ -0.68
COL8A1-201ENST00000261037 PWWP2BQ6NUJ5 590 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 GLDNQ6ZMI3 551 aaPredicted RBP10.78□□□□□ -0.68
COL8A1-201ENST00000261037 C10orf90Q96M02 699 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 SLC26A1Q9H2B4 701 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 ZNF586Q9NXT0 402 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 NTN1O95631 604 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 IL9P15248 144 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 HES3Q5TGS1 186 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 PP6455Q8WZ26 134 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 OCIAD1Q9NX40 245 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 SLC2A8Q9NY64 477 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 LRRC3CA6NJW4 275 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 TNFAIP6P98066 277 aaPredicted RBP10.78□□□□□ -0.68
COL8A1-201ENST00000261037 FAM3AP98173 230 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 TOMM34Q15785 309 aaPredicted RBP10.78□□□□□ -0.68
COL8A1-201ENST00000261037 C1orf210Q8IVY1 113 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 COMMD1Q8N668 190 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 MRGPRDQ8TDS7 321 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 CT55Q8WUE5 264 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 TM4SF19Q96DZ7 209 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 PRR13Q9NZ81 148 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 CALCRP30988 508 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 CDKN2AP42771 156 aaKnown RBP10.78□□□□□ -0.68
COL8A1-201ENST00000261037 PPP1CBP62140 327 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 CTF1Q16619 201 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 MIDNQ504T8 468 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 SLC16A12Q6ZSM3 486 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 LURAP1Q96LR2 239 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 GPR87Q9BY21 358 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 PPIL1Q9Y3C6 166 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 NPTNQ9Y639 398 aa10.78□□□□□ -0.68
COL8A1-201ENST00000261037 DHRS3O75911 302 aa10.77□□□□□ -0.68
COL8A1-201ENST00000261037 AGFG2O95081 481 aa10.77□□□□□ -0.68
COL8A1-201ENST00000261037 SLC25A5P05141 298 aaKnown RBP10.77□□□□□ -0.68
COL8A1-201ENST00000261037 DHRS7BQ6IAN0 325 aaPredicted RBP10.77□□□□□ -0.68
COL8A1-201ENST00000261037 ZNF429Q86V71 674 aa10.77□□□□□ -0.68
COL8A1-201ENST00000261037 MYPOPQ86VE0 399 aaPredicted RBP10.77□□□□□ -0.68
COL8A1-201ENST00000261037 ZNF680Q8NEM1 530 aa10.77□□□□□ -0.68
COL8A1-201ENST00000261037 CD96P40200 585 aa10.77□□□□□ -0.68
COL8A1-201ENST00000261037 IL11RAQ14626 422 aa10.77□□□□□ -0.68
COL8A1-201ENST00000261037 HFEQ30201 348 aa10.77□□□□□ -0.68
COL8A1-201ENST00000261037 LOC102723971A0A1B0GUV8 181 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 ZNF205O95201 554 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 GYPAP02724 150 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 HIST1H1DP16402 221 aaKnown RBP10.77□□□□□ -0.69
COL8A1-201ENST00000261037 PTGFRP43088 359 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 SOX8P57073 446 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 TRIP6Q15654 476 aaKnown RBP10.77□□□□□ -0.69
COL8A1-201ENST00000261037 CLEC9AQ6UXN8 241 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 SLC36A1Q7Z2H8 476 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 TGIF2LXQ8IUE1 241 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 OR2M7Q8NG81 312 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 CMTM3Q96MX0 182 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 C3orf85A0A1B0GTC6 90 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 TO15178 435 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 CDC20Q12834 499 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 SSPNQ14714 243 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 ETFDHQ16134 617 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 GAL3ST2Q9H3Q3 398 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 AAMDCQ9H7C9 122 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 FAM157AC9JC47 383 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 PLPP3O14495 311 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 PRR35P0CG20 571 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 SLC25A1P53007 311 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 GPBAR1Q8TDU6 330 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 TMPRSS5Q9H3S3 457 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 IL20Q9NYY1 176 aa10.77□□□□□ -0.69
COL8A1-201ENST00000261037 GAMTQ14353 236 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 ST3GAL2Q16842 350 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 MSRB3Q8IXL7 192 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 TRAPPC1Q9Y5R8 145 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 XIRP1Q702N8 1843 aaKnown RBP10.76□□□□□ -0.69
COL8A1-201ENST00000261037 FGF8P55075 233 aaPredicted RBP10.76□□□□□ -0.69
COL8A1-201ENST00000261037 RPS4XP62701 263 aaKnown RBP10.76□□□□□ -0.69
COL8A1-201ENST00000261037 PPP1R1AQ13522 171 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 SPSB1Q96BD6 273 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 OR2A5Q96R48 311 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 CNTD2Q9H8S5 307 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 SDK1Q7Z5N4 2213 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 MASP2O00187 686 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 ST8SIA5O15466 376 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 MBTPS2O43462 519 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 CRYBB2P43320 205 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 SSBP1Q04837 148 aaKnown RBP10.76□□□□□ -0.69
COL8A1-201ENST00000261037 SLC38A11Q08AI6 406 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 FAM109BQ6ICB4 259 aaPredicted RBP10.76□□□□□ -0.69
COL8A1-201ENST00000261037 RNASEKQ6P5S7 137 aaKnown RBP10.76□□□□□ -0.69
COL8A1-201ENST00000261037 ZNF574Q6ZN55 896 aaPredicted RBP10.76□□□□□ -0.69
COL8A1-201ENST00000261037 WDR31Q8NA23 367 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 MOGAT1Q96PD6 335 aa10.76□□□□□ -0.69
COL8A1-201ENST00000261037 TMEM147Q9BVK8 224 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms