RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 C1QL3Q5VWW1 255 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 ARL9Q6T311 187 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 TMEM192Q8IY95 271 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 MUC20Q8N307 709 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-201ENST00000258733 PAQR4Q8N4S7 273 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-201ENST00000258733 SUMF2Q8NBJ7 301 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF548Q8NEK5 533 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-201ENST00000258733 OR5AR1Q8NGP9 310 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 GRAPLQ8TC17 118 aaPredicted RBP6.82□□□□□ -1.32
GPNMB-201ENST00000258733 SLAMF6Q96DU3 332 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 ATXN7L3BQ96GX2 97 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 EIF5A2Q9GZV4 153 aaKnown RBP6.82□□□□□ -1.32
GPNMB-201ENST00000258733 SMG9Q9H0W8 520 aaKnown RBP6.82□□□□□ -1.32
GPNMB-201ENST00000258733 POLR2J3Q9H1A7 115 aaKnown RBP6.82□□□□□ -1.32
GPNMB-201ENST00000258733 S1PR5Q9H228 398 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 PLK3Q9H4B4 646 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 TNFRSF12AQ9NP84 129 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 TMEM106BQ9NUM4 274 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 ASIC5Q9NY37 505 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF581Q9P0T4 197 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 PRSS50Q9UI38 385 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 SCN1AP35498 2009 aa6.82□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF646O15015 1829 aaPredicted RBP6.81□□□□□ -1.32
GPNMB-201ENST00000258733 THSD7BQ9C0I4 1608 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 A0A0J9YY10 115 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 A0A1B0GX78 115 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 SHISA3A0PJX4 238 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 C21orf140B9A014 251 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 J3QR06 171 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 K7ESF4 209 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 MSTNO14793 375 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 HCRTO43612 131 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 OR1I1O60431 355 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 NDUFB6O95139 128 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 DUS4LO95620 317 aaKnown RBP6.81□□□□□ -1.32
GPNMB-201ENST00000258733 ABHD16AO95870 558 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 FCARP24071 287 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 TSPOP30536 169 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 EFNA5P52803 228 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 CLDN15P56746 228 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 TAF13Q15543 124 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 HBMQ6B0K9 141 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 CD200R1LQ6Q8B3 271 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 SIGLEC15Q6ZMC9 328 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 C9orf40Q8IXQ3 194 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 OR13G1Q8NGZ3 307 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF775Q96BV0 537 aaPredicted RBP6.81□□□□□ -1.32
GPNMB-201ENST00000258733 FEVQ99581 238 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 DUSP23Q9BVJ7 150 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 PARP14Q460N5 1801 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 CDC14CA4D256 554 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 DEGS1O15121 323 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 FOXH1O75593 365 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 TIAF1O95411 115 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 FURINP09958 794 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF28P17035 718 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 HOXB9P17482 250 aaPredicted RBP6.81□□□□□ -1.32
GPNMB-201ENST00000258733 FUT3P21217 361 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 PYCR1P32322 319 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 CTRLP40313 264 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 NOVP48745 357 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 ADAM8P78325 824 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 ELAVL3Q14576 367 aaKnown RBP6.81□□□□□ -1.32
GPNMB-201ENST00000258733 EFNB3Q15768 340 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 SYPL1Q16563 259 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 IAH1Q2TAA2 248 aaPredicted RBP6.81□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF260Q3ZCT1 412 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 PNKDQ8N490 385 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 OR10G4Q8NGN3 311 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 OR9G4Q8NGQ1 327 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 SMIM4Q8WVI0 70 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 PSMF1Q92530 271 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 GABRG3Q99928 467 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 SLC25A21Q9BQT8 299 aaPredicted RBP6.81□□□□□ -1.32
GPNMB-201ENST00000258733 RALYQ9UKM9 306 aaKnown RBP6.81□□□□□ -1.32
GPNMB-201ENST00000258733 ARFGEF1Q9Y6D6 1849 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 ATG2AQ2TAZ0 1938 aa6.81□□□□□ -1.32
GPNMB-201ENST00000258733 GAGE10A6NGK3 116 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 MPZL2O60487 215 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 REM1O75628 298 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 CMPK1P30085 196 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 PBX2P40425 430 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 PITX1P78337 314 aaPredicted RBP6.8□□□□□ -1.32
GPNMB-201ENST00000258733 PRDX4Q13162 271 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 HIST3H3Q16695 136 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 LRRC37A5PQ49AS3 106 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 TMEM211Q6ICI0 200 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 CEACAM20Q6UY09 585 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF429Q86V71 674 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 MARCH9Q86YJ5 346 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 SYT12Q8IV01 421 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 ADAD2Q8NCV1 583 aaKnown RBP6.8□□□□□ -1.32
GPNMB-201ENST00000258733 IL22RA2Q969J5 263 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 ANAPC13Q9BS18 74 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 ZNF703Q9H7S9 590 aaPredicted RBP6.8□□□□□ -1.32
GPNMB-201ENST00000258733 REEP1Q9H902 201 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 TAF9BQ9HBM6 251 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 APMAPQ9HDC9 416 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 SERTAD4Q9NUC0 356 aa6.8□□□□□ -1.32
GPNMB-201ENST00000258733 DNAJC27Q9NZQ0 273 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms