RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 FSCN3Q9NQT6 498 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 XKRY2A2RUG3 117 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 RFPL4AA6NLU0 287 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 RFPL4AL1F8VTS6 287 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 EML2O95834 649 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 IGHV4-34P06331 123 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 SOX8P57073 446 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 MOB3BQ86TA1 216 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 MBD1Q9UIS9 605 aaPredicted RBP16.85■□□□□ 0.29
PTPRE-201ENST00000254667 CST2P09228 141 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 SLC25A6P12236 298 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 P2RX3P56373 397 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 TNFAIP6P98066 277 aaPredicted RBP16.85■□□□□ 0.29
PTPRE-201ENST00000254667 ZNF239Q16600 458 aaKnown RBP16.85■□□□□ 0.29
PTPRE-201ENST00000254667 GAB4Q2WGN9 574 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 ZDHHC16Q969W1 377 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 CHRDL1Q9BU40 450 aa16.85■□□□□ 0.29
PTPRE-201ENST00000254667 CXorf67Q86X51 503 aaPredicted RBP16.84■□□□□ 0.29
PTPRE-201ENST00000254667 OR52B4Q8NGK2 314 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 RAB18Q9NP72 206 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 LYZL6O75951 148 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 KIR2DS2P43631 304 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 FAM122CQ6P4D5 195 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 BPIFCQ8NFQ6 507 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 CMBLQ96DG6 245 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 COX7A2P2O60397 106 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 SKP2Q13309 424 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 B3GNTL1Q67FW5 361 aaPredicted RBP16.84■□□□□ 0.29
PTPRE-201ENST00000254667 DMKNQ6E0U4 476 aaPredicted RBP16.84■□□□□ 0.29
PTPRE-201ENST00000254667 OR10Z1Q8NGY1 313 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 NTNG2Q96CW9 530 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 ADGRG7Q96K78 797 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 LRRC3BQ96PB8 259 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 B4E171 279 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 CEACAM6P40199 344 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 TSPAN7P41732 249 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 C11orf87Q6NUJ2 197 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 C8orf82Q6P1X6 216 aaPredicted RBP16.84■□□□□ 0.29
PTPRE-201ENST00000254667 TMEM123Q8N131 208 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 C17orf47Q8NEP4 570 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 C14orf79Q96F83 325 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 COL4A5P29400 1685 aa16.84■□□□□ 0.29
PTPRE-201ENST00000254667 SLC25A30Q5SVS4 291 aa16.83■□□□□ 0.29
PTPRE-201ENST00000254667 LRRC29Q8WV35 223 aa16.83■□□□□ 0.29
PTPRE-201ENST00000254667 ST8SIA2Q92186 375 aa16.83■□□□□ 0.29
PTPRE-201ENST00000254667 hADV38S2A0JD32 116 aa16.83■□□□□ 0.29
PTPRE-201ENST00000254667 ADRB1P08588 477 aa16.83■□□□□ 0.29
PTPRE-201ENST00000254667 MESTQ5EB52 335 aa16.83■□□□□ 0.29
PTPRE-201ENST00000254667 MRM2Q9UI43 246 aaKnown RBP16.83■□□□□ 0.29
PTPRE-201ENST00000254667 CROCCQ5TZA2 2017 aa16.83■□□□□ 0.28
PTPRE-201ENST00000254667 A0A1W2PR80 420 aa16.83■□□□□ 0.28
PTPRE-201ENST00000254667 OR2C1O95371 312 aa16.83■□□□□ 0.28
PTPRE-201ENST00000254667 FBP1P09467 338 aa16.83■□□□□ 0.28
PTPRE-201ENST00000254667 FGF7P21781 194 aa16.83■□□□□ 0.28
PTPRE-201ENST00000254667 OGG1O15527 345 aa16.83■□□□□ 0.28
PTPRE-201ENST00000254667 PDGFBP01127 241 aaPredicted RBP16.83■□□□□ 0.28
PTPRE-201ENST00000254667 PMS2CLQ68D20 193 aa16.83■□□□□ 0.28
PTPRE-201ENST00000254667 FAM90A27PA6NNH2 459 aa16.83■□□□□ 0.28
PTPRE-201ENST00000254667 NDUFA6P56556 154 aa16.83■□□□□ 0.28
PTPRE-201ENST00000254667 WISP3O95389 354 aaPredicted RBP16.82■□□□□ 0.28
PTPRE-201ENST00000254667 SFT2D2O95562 160 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 EXOSC2Q13868 293 aaKnown RBP16.82■□□□□ 0.28
PTPRE-201ENST00000254667 STUMQ69YW2 141 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 BTLAQ7Z6A9 289 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 GLCCI1Q86VQ1 547 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 OR6S1Q8NH40 331 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 ACSM4P0C7M7 580 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 ZNF17P17021 662 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 PHYHD1Q5SRE7 291 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 MRGPREQ86SM8 312 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 ZNF680Q8NEM1 530 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 H3BMH7 237 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 ZNF90Q03938 601 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 ZNF770Q6IQ21 691 aaPredicted RBP16.82■□□□□ 0.28
PTPRE-201ENST00000254667 BHLHA15Q7RTS1 189 aaPredicted RBP16.82■□□□□ 0.28
PTPRE-201ENST00000254667 C10orf90Q96M02 699 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 RAB40CQ96S21 281 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 ERRFI1Q9UJM3 462 aaPredicted RBP16.82■□□□□ 0.28
PTPRE-201ENST00000254667 LY75O60449 1722 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 COL11A2P13942 1736 aaPredicted RBP16.82■□□□□ 0.28
PTPRE-201ENST00000254667 PCMT1P22061 227 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 OR3A4PP47883 348 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 PDZK1IP1Q13113 114 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 OR10V1Q8NGI7 309 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 FAAP24Q9BTP7 215 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 CNTD2Q9H8S5 307 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 KIAA1217Q5T5P2 1943 aa16.82■□□□□ 0.28
PTPRE-201ENST00000254667 ADAM10O14672 748 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 CD96P40200 585 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 OR2B8PP59922 312 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 OR8B12Q8NGG6 310 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 NEIL1Q96FI4 390 aaPredicted RBP16.81■□□□□ 0.28
PTPRE-201ENST00000254667 CXorf58Q96LI9 332 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 C20orf24Q9BUV8 137 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 RAB1BQ9H0U4 201 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 OR6C3Q9NZP0 311 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 ONECUT1Q9UBC0 465 aa16.81■□□□□ 0.28
PTPRE-201ENST00000254667 PTPRZ1P23471 2315 aaPredicted RBP16.81■□□□□ 0.28
PTPRE-201ENST00000254667 PEBP1P30086 187 aaKnown RBP16.81■□□□□ 0.28
PTPRE-201ENST00000254667 TMEM104Q8NE00 496 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms