RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 TRIM77I1YAP6 450 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 SIGLEC5O15389 551 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 WBP4O75554 376 aaKnown RBP18.95■□□□□ 0.62
LSM4-201ENST00000252816 TOX4O94842 621 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 IGHA1P01876 353 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 ACAA1P09110 424 aaPredicted RBP18.95■□□□□ 0.62
LSM4-201ENST00000252816 PGA5P0DJD9 388 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 GABRA2P47869 451 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 IL13RA1P78552 427 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 GALEQ14376 348 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 BRD3OSQ6XYD6 125 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 ACP7Q6ZNF0 438 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 ANGPTL5Q86XS5 388 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 CALHM1Q8IU99 346 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 CCDC54Q8NEL0 328 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 ZNF555Q8NEP9 628 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 NPRL2Q8WTW4 380 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 FAM216AQ8WUB2 273 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 ALG8Q9BVK2 526 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 CNTD2Q9H8S5 307 aa18.95■□□□□ 0.62
LSM4-201ENST00000252816 MRPS18AQ9NVS2 196 aaKnown RBP18.95■□□□□ 0.62
LSM4-201ENST00000252816 NOS1APO75052 506 aaPredicted RBP18.94■□□□□ 0.62
LSM4-201ENST00000252816 CLIC3O95833 236 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 MPZP25189 248 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 PEX2P28328 305 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 ACTA2P62736 377 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 UBA52P62987 128 aaKnown RBP18.94■□□□□ 0.62
LSM4-201ENST00000252816 ACTG2P63267 376 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 SMN1Q16637 294 aaKnown RBP18.94■□□□□ 0.62
LSM4-201ENST00000252816 TMEM244Q5VVB8 128 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 METTL11BQ5VVY1 283 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 RBMS3Q6XE24 437 aaKnown RBP18.94■□□□□ 0.62
LSM4-201ENST00000252816 OR52I1Q8NGK6 324 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 ADAT3Q96EY9 351 aaPredicted RBP18.94■□□□□ 0.62
LSM4-201ENST00000252816 MED30Q96HR3 178 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 C1orf147Q96MC9 270 aaPredicted RBP18.94■□□□□ 0.62
LSM4-201ENST00000252816 DCTN5Q9BTE1 182 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 CHST5Q9GZS9 411 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 ISG20L2Q9H9L3 353 aaKnown RBP18.94■□□□□ 0.62
LSM4-201ENST00000252816 RASL12Q9NYN1 266 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 SLC25A10Q9UBX3 287 aaPredicted RBP18.94■□□□□ 0.62
LSM4-201ENST00000252816 MAB21L2Q9Y586 359 aa18.94■□□□□ 0.62
LSM4-201ENST00000252816 IGKV1-27A0A075B6S5 117 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 FAM230AA0A1W2PPH8 454 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 GPR37O15354 613 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 FADS2O95864 444 aaKnown RBP18.93■□□□□ 0.62
LSM4-201ENST00000252816 ISG15P05161 165 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 HTR1AP08908 422 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 CCR9P51686 369 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 RAB40BQ12829 278 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 GPR157Q5UAW9 335 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 RUSC1-AS1Q66K80 236 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 BATF2Q8N1L9 274 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 OR10AC1Q8NH08 325 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 DUX5Q96PT3 197 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 NRIP2Q9BQI9 281 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 ERVK13-1Q9NX77 482 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 SLC7A11Q9UPY5 501 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 POLDIP2Q9Y2S7 368 aa18.93■□□□□ 0.62
LSM4-201ENST00000252816 RPL36Q9Y3U8 105 aaKnown RBP18.93■□□□□ 0.62
LSM4-201ENST00000252816 TENM1Q9UKZ4 2725 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 CENPVL3A0A0U1RRI6 287 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 MDFIC2A0A1B0GVS7 189 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 RFPL4AA6NLU0 287 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 OR4C45A6NMZ5 311 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 RFPL4AL1F8VTS6 287 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 GATBO75879 557 aaKnown RBP18.92■□□□□ 0.62
LSM4-201ENST00000252816 SMIM21Q3B7S5 101 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 ZNF691Q5VV52 312 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 CD177Q8N6Q3 437 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 ZNRF1Q8ND25 227 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 C8orf46Q8TAG6 207 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 H1FXQ92522 213 aaKnown RBP18.92■□□□□ 0.62
LSM4-201ENST00000252816 C10orf35Q96D05 121 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 SDSLQ96GA7 329 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 PKIBQ9C010 78 aa18.92■□□□□ 0.62
LSM4-201ENST00000252816 ELL3Q9HB65 397 aaPredicted RBP18.92■□□□□ 0.62
LSM4-201ENST00000252816 DNAJC9-AS1A6NH13 148 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 NDUFB7P17568 137 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 CAV3P56539 151 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 ALKBH1Q13686 389 aaKnown RBP18.91■□□□□ 0.62
LSM4-201ENST00000252816 SYS1Q8N2H4 156 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 PACRGLQ8N7B6 248 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 OR51A4Q8NGJ6 313 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 CNIH3Q8TBE1 160 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 CYGBQ8WWM9 190 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 FGGYQ96C11 551 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 MRPL48Q96GC5 212 aaKnown RBP18.91■□□□□ 0.62
LSM4-201ENST00000252816 HES4Q9HCC6 221 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 INPP5EQ9NRR6 644 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 ONECUT1Q9UBC0 465 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 KPTNQ9Y664 436 aa18.91■□□□□ 0.62
LSM4-201ENST00000252816 IGKV1-9A0A0C4DH69 117 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 E9PI62 339 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 NXPH2O95156 264 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 SERPINA3P01011 423 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 FUT6P51993 359 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 ERVK11-1P61568 191 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 ACTG1P63261 375 aa18.9■□□□□ 0.62
LSM4-201ENST00000252816 IL24Q13007 206 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms