RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 C11orf88Q6PI97 169 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 ACP7Q6ZNF0 438 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 KCTD8Q6ZWB6 473 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 THAP5Q7Z6K1 395 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.37□□□□□ -1.07
VPS50-201ENST00000251739 POC1AQ8NBT0 407 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 TMEM185AQ8NFB2 350 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 OR5A2Q8NGI9 324 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 PIFOQ8TCI5 191 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 THEM6Q8WUY1 208 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 RORBQ92753 470 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 OTULINQ96BN8 352 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 SSX3Q99909 188 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 CHID1Q9BWS9 393 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 YIPF3Q9GZM5 350 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 SLC25A19Q9HC21 320 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 SF3B6Q9Y3B4 125 aaKnown RBP8.37□□□□□ -1.07
VPS50-201ENST00000251739 CCDC182A6NF36 153 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 ANKRD61A6NGH8 418 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 VGLL3A8MV65 326 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 ANGPTL7O43827 346 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 NOS1APO75052 506 aaPredicted RBP8.36□□□□□ -1.07
VPS50-201ENST00000251739 SRSF10O75494 262 aaKnown RBP8.36□□□□□ -1.07
VPS50-201ENST00000251739 CST1P01037 141 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 HMGN1P05114 100 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 PGA5P0DJD9 388 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 OSMP13725 252 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 FAHP16930 419 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 FSTP19883 344 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 MPZP25189 248 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 DLX6P56179 175 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 GNGT1P63211 74 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 BLMHQ13867 455 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 SMIM21Q3B7S5 101 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 CEP78Q5JTW2 689 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 HAGHLQ6PII5 290 aaPredicted RBP8.36□□□□□ -1.07
VPS50-201ENST00000251739 Q6ZSR3 168 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 KRT77Q7Z794 578 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 MKXQ8IYA7 352 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 HS3ST5Q8IZT8 346 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 CD177Q8N6Q3 437 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 KLHDC1Q8N7A1 406 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 OR51G2Q8NGK0 314 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 OR4C13Q8NGP0 309 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 FAM81AQ8TBF8 368 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 WIPF2Q8TF74 440 aaPredicted RBP8.36□□□□□ -1.07
VPS50-201ENST00000251739 CCDC124Q96CT7 223 aaKnown RBP8.36□□□□□ -1.07
VPS50-201ENST00000251739 NSL1Q96IY1 281 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 NRIP2Q9BQI9 281 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 HES4Q9HCC6 221 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 GPR84Q9NQS5 396 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 RASL12Q9NYN1 266 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 LAMP5Q9UJQ1 280 aa8.36□□□□□ -1.07
VPS50-201ENST00000251739 TMEM269A0A1B0GVZ9 245 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 FAM90A8PA6NJQ4 464 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 AQP12BA6NM10 295 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 G3V4G9 280 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 H0YAE9 185 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 GSC2O15499 205 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 ZNF254O75437 659 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 DHRS3O75911 302 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 TTRP02766 147 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 PAX6P26367 422 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 POU1F1P28069 291 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 GABRA2P47869 451 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 HCCSP53701 268 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 ERVK11-1P61568 191 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 RPL31P62899 125 aaKnown RBP8.35□□□□□ -1.07
VPS50-201ENST00000251739 MFGE8Q08431 387 aaPredicted RBP8.35□□□□□ -1.07
VPS50-201ENST00000251739 APOFQ13790 326 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 LY6EQ16553 131 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 DMRTC1Q5HYR2 192 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 TMEM200BQ69YZ2 307 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 KCTD18Q6PI47 426 aaPredicted RBP8.35□□□□□ -1.07
VPS50-201ENST00000251739 Q6ZTK2 550 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 AQP12AQ8IXF9 295 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 ZNF679Q8IYX0 411 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 FAM185AQ8N0U4 392 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 Q8N2B8 174 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 ZNF671Q8TAW3 534 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 OR51E1Q8TCB6 317 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 CANT1Q8WVQ1 401 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 CLPTM1LQ96KA5 538 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 RHOVQ96L33 236 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 ZNF488Q96MN9 340 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 HIST1H2AAQ96QV6 131 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 OR8B4Q96RC9 309 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 TEAD3Q99594 435 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 PBOV1Q9GZY1 135 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 FAM234AQ9H0X4 552 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 ZNF702PQ9H963 129 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 RAB18Q9NP72 206 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 COPS3Q9UNS2 423 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 FOXJ3Q9UPW0 622 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 KIAA2026Q5HYC2 2103 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 TENM3Q9P273 2699 aa8.35□□□□□ -1.07
VPS50-201ENST00000251739 A0A1B0GTI1 187 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 PQLC2LA1A4F0 135 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 RFPL4AA6NLU0 287 aa8.34□□□□□ -1.07
VPS50-201ENST00000251739 ODF3BA8MYP8 253 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms