RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ARMCX4Q5H9R4 360 aa20.22■□□□□ 0.83
SDF2L1-201ENST00000248958 ZNF788Q6ZQV5 615 aa20.22■□□□□ 0.83
SDF2L1-201ENST00000248958 PNLDC1Q8NA58 520 aaKnown RBP20.22■□□□□ 0.83
SDF2L1-201ENST00000248958 DNAAF1Q8NEP3 725 aa20.22■□□□□ 0.83
SDF2L1-201ENST00000248958 FBLIM1Q8WUP2 373 aa20.22■□□□□ 0.83
SDF2L1-201ENST00000248958 SEH1LQ96EE3 360 aa20.22■□□□□ 0.83
SDF2L1-201ENST00000248958 BORCS8Q96FH0 119 aa20.22■□□□□ 0.83
SDF2L1-201ENST00000248958 DMRTB1Q96MA1 342 aa20.22■□□□□ 0.83
SDF2L1-201ENST00000248958 VCX3BQ9H321 246 aa20.22■□□□□ 0.83
SDF2L1-201ENST00000248958 CNOT2Q9NZN8 540 aaKnown RBP20.22■□□□□ 0.83
SDF2L1-201ENST00000248958 A0A0A6YYJ9 748 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 FAM230AA0A1W2PPH8 454 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 OR2AT4A6NND4 320 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 TCF21O43680 179 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 PGA5P0DJD9 388 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 IL24Q13007 206 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 SMIM21Q3B7S5 101 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 LRRC10Q5BKY1 277 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 OR13C3Q8NGS6 347 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 OR5AK2Q8NH90 309 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 ANGPTL6Q8NI99 470 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 TRMT10AQ8TBZ6 339 aaKnown RBP20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 FGGYQ96C11 551 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 ADAT3Q96EY9 351 aaPredicted RBP20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 NEK6Q9HC98 313 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 SMURF1Q9HCE7 757 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 SNTG1Q9NSN8 517 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 PLCXD1Q9NUJ7 323 aa20.21■□□□□ 0.83
SDF2L1-201ENST00000248958 SVEP1Q4LDE5 3571 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 EFCAB10A6NFE3 127 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 C22orf46C9J442 243 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 GNAO1P09471 354 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 PRKACBP22694 351 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 ETV1P50549 477 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 IL13RA1P78552 427 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 RPL22L1Q6P5R6 122 aaKnown RBP20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 ACP7Q6ZNF0 438 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 OR5T2Q8NGG2 359 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 ST8SIA4Q92187 359 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 GGHQ92820 318 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 RASSF4Q9H2L5 321 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 OCEL1Q9H607 264 aa20.2■□□□□ 0.82
SDF2L1-201ENST00000248958 TRBV2A0A0J9YWF9 115 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 SYNGR1O43759 233 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 ZFPL1O95159 310 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 ATF1P18846 271 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 AMY2BP19961 511 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 FPR2P25090 351 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 RBP2P50120 134 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 ATP1B3P54709 279 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 BTN2A1Q7KYR7 527 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 CALHM1Q8IU99 346 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 ZNF418Q8TF45 676 aaPredicted RBP20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 TMEM158Q8WZ71 300 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 SPSB1Q96BD6 273 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 UPRTQ96BW1 309 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 NUP50Q9UKX7 468 aa20.19■□□□□ 0.82
SDF2L1-201ENST00000248958 E9PI62 339 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 SIGLEC5O15389 551 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 PSG2P11465 335 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 GABRA2P47869 451 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 ST3GAL4Q11206 333 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 LHFPL2Q6ZUX7 228 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 ANGPTL5Q86XS5 388 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 FAM216BQ8N7L0 139 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 OR52N1Q8NH53 320 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 NPRL2Q8WTW4 380 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 NRG4Q8WWG1 115 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 GAFA1Q96PS6 74 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 NRIP2Q9BQI9 281 aa20.18■□□□□ 0.82
SDF2L1-201ENST00000248958 NXPH2O95156 264 aa20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 OCM2P0CE71 109 aa20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 OCMP0CE72 109 aaPredicted RBP20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 AZGP1P25311 298 aaKnown RBP20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 CDK5R1Q15078 307 aa20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 OR2G6Q5TZ20 316 aa20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 USP43Q70EL4 1123 aa20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 OR51A4Q8NGJ6 313 aa20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 OR10AC1Q8NH08 325 aa20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 HES4Q9HCC6 221 aa20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 BABAM2Q9NXR7 383 aa20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 PSORS1C1Q9UIG5 152 aa20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 RPUSD1Q9UJJ7 312 aaKnown RBP20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 DHDHQ9UQ10 334 aa20.17■□□□□ 0.82
SDF2L1-201ENST00000248958 A0A1B0GW55 424 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 ZNF879B4DU55 563 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 FCN3O75636 299 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 ALX3O95076 343 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 CYB5AP00167 134 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 MT-ND2P03891 347 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 DUX4L2P0CJ85 424 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 DUX4L3P0CJ86 424 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 DUX4L4P0CJ87 422 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 DUX4L5P0CJ88 424 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 DUX4L6P0CJ89 424 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 DUX4L7P0CJ90 424 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 GTF2A1P52655 376 aaPredicted RBP20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 AQP4P55087 323 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 CAV3P56539 151 aa20.16■□□□□ 0.82
SDF2L1-201ENST00000248958 IKZF1Q13422 519 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms