RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 ZNF671Q8TAW3 534 aa13.4□□□□□ -0.26
CLPP-201ENST00000245816 LRRC29Q8WV35 223 aa13.4□□□□□ -0.26
CLPP-201ENST00000245816 RAB40AQ8WXH6 277 aa13.4□□□□□ -0.26
CLPP-201ENST00000245816 DMRTB1Q96MA1 342 aa13.4□□□□□ -0.26
CLPP-201ENST00000245816 JAM3Q9BX67 310 aa13.4□□□□□ -0.26
CLPP-201ENST00000245816 CCDC90BQ9GZT6 254 aa13.4□□□□□ -0.26
CLPP-201ENST00000245816 OR51I2Q9H344 312 aa13.4□□□□□ -0.26
CLPP-201ENST00000245816 FKBP14Q9NWM8 211 aa13.4□□□□□ -0.26
CLPP-201ENST00000245816 CLN8Q9UBY8 286 aa13.4□□□□□ -0.26
CLPP-201ENST00000245816 GTF2A1LQ9UNN4 478 aa13.4□□□□□ -0.26
CLPP-201ENST00000245816 IGHV2-70DA0A0C4DH43 119 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 KIR2DS1A0A191URI9 304 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 A0A1B0GVI7 797 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 DNAJC9-AS1A6NH13 148 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 CDIPTO14735 213 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 GPR37O15354 613 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 RGS10O43665 173 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 PLATP00750 562 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 CDK1P06493 297 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 LIPFP07098 398 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 LIMS3P0CW19 117 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 LIMS4P0CW20 117 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 C21orf33P30042 268 aaPredicted RBP13.39□□□□□ -0.27
CLPP-201ENST00000245816 SLC35A2P78381 396 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 WDR25Q64LD2 544 aaPredicted RBP13.39□□□□□ -0.27
CLPP-201ENST00000245816 BTNL3Q6UXE8 466 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 FGFRL1Q8N441 504 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 SGCDQ92629 289 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 GCDHQ92947 438 aaPredicted RBP13.39□□□□□ -0.27
CLPP-201ENST00000245816 RNF166Q96A37 237 aaPredicted RBP13.39□□□□□ -0.27
CLPP-201ENST00000245816 UPRTQ96BW1 309 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 DUSP21Q9H596 190 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 ACOXLQ9NUZ1 547 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 PAK1IP1Q9NWT1 392 aaPredicted RBP13.39□□□□□ -0.27
CLPP-201ENST00000245816 RASL12Q9NYN1 266 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 CLEC2DQ9UHP7 191 aa13.39□□□□□ -0.27
CLPP-201ENST00000245816 A0A1B0GW55 424 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 ZNF732B4DXR9 585 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 P2RY10O00398 339 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 SYT7O43581 403 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 ECDO95905 644 aaPredicted RBP13.38□□□□□ -0.27
CLPP-201ENST00000245816 ACAA1P09110 424 aaPredicted RBP13.38□□□□□ -0.27
CLPP-201ENST00000245816 DUX4L2P0CJ85 424 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 DUX4L3P0CJ86 424 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 DUX4L4P0CJ87 422 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 DUX4L5P0CJ88 424 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 DUX4L6P0CJ89 424 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 DUX4L7P0CJ90 424 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 FAHP16930 419 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 GPM6AP51674 278 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 OR12D2P58182 307 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 WDR38Q5JTN6 314 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 SFRP4Q6FHJ7 346 aaPredicted RBP13.38□□□□□ -0.27
CLPP-201ENST00000245816 DUX4L9Q6RFH8 374 aaPredicted RBP13.38□□□□□ -0.27
CLPP-201ENST00000245816 KCTD8Q6ZWB6 473 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 MOB3CQ70IA8 216 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 FAM90A1Q86YD7 464 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 ZNF573Q86YE8 665 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 PRSS35Q8N3Z0 413 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 OR2G2Q8NGZ5 317 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 C4orf36Q96KX1 117 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 MRI1Q9BV20 369 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 FGF23Q9GZV9 251 aaPredicted RBP13.38□□□□□ -0.27
CLPP-201ENST00000245816 SMURF1Q9HCE7 757 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 DUX4Q9UBX2 424 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 ERGIC3Q9Y282 383 aa13.38□□□□□ -0.27
CLPP-201ENST00000245816 CAB39Q9Y376 341 aaPredicted RBP13.38□□□□□ -0.27
CLPP-201ENST00000245816 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.37□□□□□ -0.27
CLPP-201ENST00000245816 MYL12BO14950 172 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 ADAM20O43506 726 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 NOS1APO75052 506 aaPredicted RBP13.37□□□□□ -0.27
CLPP-201ENST00000245816 SERPINA3P01011 423 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 HKR1P10072 659 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 PRTN3P24158 256 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 FPR2P25090 351 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 GBX2P52951 348 aaPredicted RBP13.37□□□□□ -0.27
CLPP-201ENST00000245816 SLC9A3R2Q15599 337 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 ARMCX4Q5H9R4 360 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 PLCXD3Q63HM9 321 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 C9orf139Q6ZV77 190 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 SLC36A1Q7Z2H8 476 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 BOLLQ8N9W6 283 aaKnown RBP13.37□□□□□ -0.27
CLPP-201ENST00000245816 PP6455Q8WZ26 134 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 RPL3LQ92901 407 aaKnown RBP13.37□□□□□ -0.27
CLPP-201ENST00000245816 ZNF649Q9BS31 505 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 ISG20L2Q9H9L3 353 aaKnown RBP13.37□□□□□ -0.27
CLPP-201ENST00000245816 PLEKHA1Q9HB21 404 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 FRRS1LQ9P0K9 344 aa13.37□□□□□ -0.27
CLPP-201ENST00000245816 ANKRD61A6NGH8 418 aa13.36□□□□□ -0.27
CLPP-201ENST00000245816 ENSAO43768 121 aaKnown RBP13.36□□□□□ -0.27
CLPP-201ENST00000245816 GATBO75879 557 aaKnown RBP13.36□□□□□ -0.27
CLPP-201ENST00000245816 GYPAP02724 150 aa13.36□□□□□ -0.27
CLPP-201ENST00000245816 MT-ND2P03891 347 aa13.36□□□□□ -0.27
CLPP-201ENST00000245816 HTR1AP08908 422 aa13.36□□□□□ -0.27
CLPP-201ENST00000245816 MMP9P14780 707 aa13.36□□□□□ -0.27
CLPP-201ENST00000245816 GABARAPL2P60520 117 aa13.36□□□□□ -0.27
CLPP-201ENST00000245816 CEP78Q5JTW2 689 aa13.36□□□□□ -0.27
CLPP-201ENST00000245816 OR2G6Q5TZ20 316 aa13.36□□□□□ -0.27
CLPP-201ENST00000245816 PRSS48Q7RTY5 328 aa13.36□□□□□ -0.27
CLPP-201ENST00000245816 GATAD2BQ8WXI9 593 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms